| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2502 |
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| Symbol | |
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| ID | 5084853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 2550724 |
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| End bp | 2551986 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640484064 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001168695 |
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| Protein GI | 146278536 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4597] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.318532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAACG TCGCGGACGC GCCGAAGGAC ACCTTTCGGC TCAGCATGCT GCTATACGAT
ACGCGGTATC GTTCGCTGAC CATACAGGTC TTCGTCTTCT TCCTGTTCAT GGCCGGCGCC
GCCTGGCTGG TGGACAACAC CATGCGCAAC CTCGAGGCGC TGGGAAAGGA TTTCAACTTC
GGCTTCCTGT GGAACCGCGC GGGCTACGAC ATCAGCCAGC GGCTCGTGGA ATACACCAAC
GACAGCACGC ACGGCCGGGC CATGCTGGTG GGCCTGCTGA ACACGCTGCT GGTGGCCCTC
CTCGGCTGCA TCGCCGCAAC CGTGATCGGC GTGATCGTGG GTGTCCTGCG CCTGTCGAAG
AACTGGCTCG TCGGGCGGCT GATGACCGTC TATGTCGAGA TCTTCCGCAA CGTGCCGCTG
CTCCTGTGGA TCCTGCTGAT CTACGCCGTC TTCACCGAGG CGACGCCGGC GCCCAACGCC
TTCCGCCCGA ACCCCGAGAC CGGCCTTGCC GACCGCTCGA TGTTCCTCGA TGCGATCGCC
GTGACCAACC GCTACACCGC GGTGCCGAAC CCCGTCTTCA GCCGCGAGCT GGGCTGGCTC
GACCTCGGGC TCTTCTACAT CAACATCGAC GTTCTGGCGG TCCTTGCGGC GGCCGTGCTG
GGCTGGTGGC TGAACCGGAT GGTGAAGGCG CGCGCTACCC GGATCCAGAA CGAGACCGGC
GTGCGGCCCG CCACCTGGTG GTCATCGGTT CTGCTGCTTC TGGGGTTGCC GGTCGCGGTG
CTGCTGGCGC TCGGCTTCCA TCTCGAGTTT CCCGAACTGC GCGGCTTCAA CTTCGTGGGC
GGCCTGAACG TCTCGAACTC CTTCATGGCG CTCTGGCTGG CGCTCTCGCT CTACACCGGG
GCCTTCATCG CCGAGATCGT GCGGGCGGGC ATCCTCGCCA TCTCGCGCGG CCAGTCCGAG
GCGGCCTTCG CGCTCGGCCT GCGACCGGGG CGGACGATGA GCCTGGTGAT CCTGCCCCAG
GCGCTGCGCG TCATCATCCC GCCGCTGATC TCGCAATATC TGAACCTGAC GAAGAACTCC
TCGCTCGCGA TTGCGGTGGG ATACCTCGAC CTGCGCGGCA CGCTGGGGGG GATCACGCTG
AACCAGACCG GGCGCGAACT GGAATGCGTG CTCCTGATGA TGCTGATCTA CCTTGCGATC
AGCCTCGTGA TCTCGGCGGT GATGAACGTC TACAACGCCG CCGTGAAGCT GAAGGAGCGC
TGA
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| Protein sequence | MANVADAPKD TFRLSMLLYD TRYRSLTIQV FVFFLFMAGA AWLVDNTMRN LEALGKDFNF
GFLWNRAGYD ISQRLVEYTN DSTHGRAMLV GLLNTLLVAL LGCIAATVIG VIVGVLRLSK
NWLVGRLMTV YVEIFRNVPL LLWILLIYAV FTEATPAPNA FRPNPETGLA DRSMFLDAIA
VTNRYTAVPN PVFSRELGWL DLGLFYINID VLAVLAAAVL GWWLNRMVKA RATRIQNETG
VRPATWWSSV LLLLGLPVAV LLALGFHLEF PELRGFNFVG GLNVSNSFMA LWLALSLYTG
AFIAEIVRAG ILAISRGQSE AAFALGLRPG RTMSLVILPQ ALRVIIPPLI SQYLNLTKNS
SLAIAVGYLD LRGTLGGITL NQTGRELECV LLMMLIYLAI SLVISAVMNV YNAAVKLKER
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