Gene Rsph17025_2481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2481 
Symbol 
ID5083824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2529401 
End bp2530540 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content64% 
IMG OID640484043 
Productcitrate (pro-3S)-lyase 
Protein accessionYP_001168674 
Protein GI146278515 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.565353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAACA TTGTTCGGCG GATGGGCGCA TCGTTCGAGG ATTACTGCGT TGCTGGTAGG 
TTTCGCGCAA TCTCTGATCC GCGGACCATC GGTTTCTGCA GGCGCGAAAC ACCCTTGCGC
CACGCAGCGC AATATAATAA CCAATCTCGC CAGAGAGATG AAACTTCATT GCCGAGAGAT
CCGATGAGCT TCCGACTTCA GCCTCCGCCG CCCGCCCGTC CGAACCGCTG CCAGCTGTTC
GGTCCCGGCT CGCGGCCCGC CCTGTTCGAG AAGATGGCGG CCTCGGCGGC GGACGTGGTC
AATCTCGATC TGGAAGATTC GGTTGCGCCC GACGACAAGG CTCAGGCCCG CCTGAACATC
ATCGAGGCGA TCAACACGCT CGACTGGGGA AAGAAATATC TCTCGGTGCG GATCAACGGG
CTCGACACGC CCTTCTGGTA TCGCGACGTG GTGGACCTGC TCGAGCAGGC GGGCGACCGG
CTGGACCAGA TCATGATCCC AAAGGTGGGG TGCGCCGCCG ACGTCTATGC GGTCGATGCG
CTGGTGACGG CCATCGAGCG CGCCAAGGGC CGCACGAAGC CCGTCAGCTT CGAGGTGATC
ATCGAATCAG CCGCCGGCAT CGCCCATGTC GAGGAGATCG CCGCCGCGTC TCCCCGGTTG
CAGGCCATGA GCCTCGGCGC CGCCGATTTC GCCGCGTCGA TGGGGATGCA GACGACGGGT
ATCGGTGGGA CGCAGGAAAA CTACTACATG TTGCATGAGG GGCAGAAGCA CTGGTCCGAT
CCGTGGCACT GGGCGCAGGC AGCCATCGTT GCGGCCTGCC GCACGCACGG GATCCTGCCG
GTGGATGGCC CCTTCGGCGA CTTCTCGGAC GATGAGGGCT TCCGCGCCCA GGCGCGCCGC
TCGGCCACCC TTGGCATGGT GGGCAAGTGG GCCATCCACC CCAAGCAGGT GGCTCTGGCG
AACGAGGTAT TCACCCCCTC CGACAAGGCG GTAGCCGAGG CGCGCGAGAT CCTCGCCGCG
ATGGAAGCCG CCAAGGCGCG CGGGGAAGGA GCGACGGTTT ACAAGGGAAG ACTTGTTGAC
ATCGCGTCCA TCAAACAGGC AGAAGTGATC GTAAGGCAGG CGGAAATGAT CTCAGCCTGA
 
Protein sequence
MHNIVRRMGA SFEDYCVAGR FRAISDPRTI GFCRRETPLR HAAQYNNQSR QRDETSLPRD 
PMSFRLQPPP PARPNRCQLF GPGSRPALFE KMAASAADVV NLDLEDSVAP DDKAQARLNI
IEAINTLDWG KKYLSVRING LDTPFWYRDV VDLLEQAGDR LDQIMIPKVG CAADVYAVDA
LVTAIERAKG RTKPVSFEVI IESAAGIAHV EEIAAASPRL QAMSLGAADF AASMGMQTTG
IGGTQENYYM LHEGQKHWSD PWHWAQAAIV AACRTHGILP VDGPFGDFSD DEGFRAQARR
SATLGMVGKW AIHPKQVALA NEVFTPSDKA VAEAREILAA MEAAKARGEG ATVYKGRLVD
IASIKQAEVI VRQAEMISA