Gene Rsph17025_2443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2443 
SymbolmscL 
ID5084832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2494591 
End bp2495031 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content64% 
IMG OID640484005 
Productlarge-conductance mechanosensitive channel 
Protein accessionYP_001168636 
Protein GI146278477 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1970] Large-conductance mechanosensitive channel 
TIGRFAM ID[TIGR00220] large conductance mechanosensitive channel protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.954561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.582665 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTC TCGACGAGTT CCGGTCCTTC ATCGCCAAGG GCAACGTGAT GGACATGGCG 
GTGGGCATCA TCATAGGCGC GGCCTTCACC GGCATCGTCT CGAGCCTGGT GGCCGATCTG
ATCAACCCGG TCATCGGGCT CATCACCGGC GGGATCGACT TCTCGAACGT GTTCGTGAAC
CTCGGCGACG GCGACTACAC GAGCCTCGCC GCCGCCCGTG AGGCGGGCGC GCCGGTCTTT
GCCTACGGCG CCTTCATCAC CGCCGTCATC AACTTCCTCA TCATCGCCTG GGTCGTGTTC
CTGCTGGTGA AGATGGTGAA CCGGGTGAAG GAGACCGCCC TGCACAAGAG CCCGCCCGCG
GCCAAGGCCG AGCCGGCCGG ACCCACGCAG GAGCAGTTGC TGGCCGAGAT CCGGGTTCTT
CTGAAAAAGG CCTCGGCCTG A
 
Protein sequence
MSILDEFRSF IAKGNVMDMA VGIIIGAAFT GIVSSLVADL INPVIGLITG GIDFSNVFVN 
LGDGDYTSLA AAREAGAPVF AYGAFITAVI NFLIIAWVVF LLVKMVNRVK ETALHKSPPA
AKAEPAGPTQ EQLLAEIRVL LKKASA