Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2443 |
Symbol | mscL |
ID | 5084832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 2494591 |
End bp | 2495031 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640484005 |
Product | large-conductance mechanosensitive channel |
Protein accession | YP_001168636 |
Protein GI | 146278477 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1970] Large-conductance mechanosensitive channel |
TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.954561 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.582665 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATTC TCGACGAGTT CCGGTCCTTC ATCGCCAAGG GCAACGTGAT GGACATGGCG GTGGGCATCA TCATAGGCGC GGCCTTCACC GGCATCGTCT CGAGCCTGGT GGCCGATCTG ATCAACCCGG TCATCGGGCT CATCACCGGC GGGATCGACT TCTCGAACGT GTTCGTGAAC CTCGGCGACG GCGACTACAC GAGCCTCGCC GCCGCCCGTG AGGCGGGCGC GCCGGTCTTT GCCTACGGCG CCTTCATCAC CGCCGTCATC AACTTCCTCA TCATCGCCTG GGTCGTGTTC CTGCTGGTGA AGATGGTGAA CCGGGTGAAG GAGACCGCCC TGCACAAGAG CCCGCCCGCG GCCAAGGCCG AGCCGGCCGG ACCCACGCAG GAGCAGTTGC TGGCCGAGAT CCGGGTTCTT CTGAAAAAGG CCTCGGCCTG A
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Protein sequence | MSILDEFRSF IAKGNVMDMA VGIIIGAAFT GIVSSLVADL INPVIGLITG GIDFSNVFVN LGDGDYTSLA AAREAGAPVF AYGAFITAVI NFLIIAWVVF LLVKMVNRVK ETALHKSPPA AKAEPAGPTQ EQLLAEIRVL LKKASA
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