| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2416 |
|---|
| Symbol | |
|---|
| ID | 5083648 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 2463215 |
|---|
| End bp | 2465164 |
|---|
| Gene Length | 1950 bp |
|---|
| Protein Length | 649 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640483978 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001168609 |
|---|
| Protein GI | 146278450 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.731773 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTCG GTTCCCATCC CGCGGCGCCG TCCGCGGAAG ATCTCTTCGA AATGCTGGGC
TATCGCGAGG CCGAAACCTC GGACGCCGGG ACGGTCGAGG CCACGGTGCT CGACATCCCC
TGGAGCGACG CGATCTCGGA GCGGGCGCGC AGCTTCATCG TGGGATGGGA GACCGGCGGG
CGCGCCTTCT ACGAGCGCGT GATCAAGGCG CGCCCGGTCT GGCCCGAGTT CGCCTCGGGC
ATCACCATCG GTTGCGGCTA CGACCTCGGC TACCATCGGC CCGACGAGTT CCGCGCCGAC
TGGCAGGGCC GCCTGCCCGG AGCGGCCATC GAGAGGCTCT CGCGCACGAT CGGCTTTCGC
ACCGACGAGC CGGGACGCCC GGCCAAGGTG GCGCAGGCGC GCGCGCTAGT CCGCTCGCTC
GCCGACATCG TGATCCCTTG GGAGGTGGCG ATCGGCCAGT TCGACGAGGG CAAGATGCCC
AAGCTGGTGT CCCAGCTTTA CCGCTCGCTC GATCATCTCG ACCGGCTTCA TCCGCACGGG
CGCGGCGCGT TGCTCAGCCT CGTGTTCAAC CGCGGCTCGG GCGGCTTCGT CTCGTCGAAG
GACCGCTTCC GCGAGATGCG CGCGATCGCG CGGGCGATGG CCACGGGCGA GCGGTCCGAG
ATGGCCCGCA TCCCGGATCT TCTGCGCGCC ATGAGCCGGG TCTGGGGCGA GGGCTCGAGC
CTCGCGCGGC GGCGGCGCGA GGAGGCCGAC CTGTTCGAGG CGGGCCTCTC CGAAGAGCGG
CTGACCGAGG CGGTGGTGGC GCTGCGCCAG CACGGCGAGG CGGAAGCACC CGCCGCGCCG
CTGGCCGAGC AGCACGAGGA CGTGGCGGAA GCCAGCGATG ACGAGGAGAC GGTCGAGGAG
CCGGCGCTGA CCGAGGCGCC GGGCCCGACG GTTGCGGATG TGCGCTGGAA CCCCAACGAC
GACGACCATC CCGACTACCG CCACCTGCCG CGCGCAGGGC AGGGCGCAAC CTTCGACCTG
ACGGCGGCGG ATCTCGAGAG GCTCGTGCGG CTCAACGTCT TTCGCGTGCG GCCCGGGCCG
CTTGTCTTCG CGCTGCGCGG CTGCCGGATC GCCGGGGCCG ACCTGCGCGA GGATGTGGAG
GTGCTGACGC TGGTGGACCA GCGGCCGGAC CATCGCGACT ACCGCTGCGT CATGGGCGTG
CTCGACCGCG GGGCGGGCCG CATGCACGCC TACCGCGCCT CGACGGTGCC CGAGGCCAGG
GCGCTGGTGA CGGGCGTCCA GAAGGCGCGG CAGGGGATCT TCGAGGGCAA CCTGCTGCCG
ACGGGCTGCT ACACCTACAC GGTCGGCACC CACCGCGCGG GCACCTCGGG CGAGATCCGC
GGCGTGCTGC GGCTGGCCTC GACCGCCACG GGGGCGGCCG AGGTGGTCGC GCTGCGCAGC
CTTCAGGACG TGGTCTATGA CCGGCGCGAC TTCTGGCACC GCTGCGCGCC GGCCGACAAC
ATCCATCCCG GCCGGCGCCG CGAGGGGTTC TCGTCGCTCG GCTGCCTGAC GCTGCCGGGC
GACTACGACC GGGGCAGCCG CAGCCATTCG GGCCTCTGGG CCGACTTCCG GGTGGCGCTG
GGCATGGGGC GGACCTTCGC CGCCTCCGAC GACGGGCGAC AGTTCAGCGT CATGCTGCTG
ACCGGGGCCG ATGCGGCGCT TGTCGCCGGC CTGCGCGGCG CGCCGGCGGA GGGTCTGCGG
CGTCTGCGCT TCGGATCGAC CGGGGCGGCG GTTGCGCGGC TTCAGGCGCA GATGGGTCTG
GCACCCGACC GGCAGCGGCT GGTGGGGCCC GTGACCCGCG CGGCCTTCGT GGCCCTCCAG
CAGCGCAGGC TCGGCTGGGC GGACGGCATC CTGTCGCCCG AGATGGAGGC CGATCTCGGC
CTCGACGTGT TCCGAGAGGG AGAAGAGTGA
|
|---|
| Protein sequence | MDVGSHPAAP SAEDLFEMLG YREAETSDAG TVEATVLDIP WSDAISERAR SFIVGWETGG
RAFYERVIKA RPVWPEFASG ITIGCGYDLG YHRPDEFRAD WQGRLPGAAI ERLSRTIGFR
TDEPGRPAKV AQARALVRSL ADIVIPWEVA IGQFDEGKMP KLVSQLYRSL DHLDRLHPHG
RGALLSLVFN RGSGGFVSSK DRFREMRAIA RAMATGERSE MARIPDLLRA MSRVWGEGSS
LARRRREEAD LFEAGLSEER LTEAVVALRQ HGEAEAPAAP LAEQHEDVAE ASDDEETVEE
PALTEAPGPT VADVRWNPND DDHPDYRHLP RAGQGATFDL TAADLERLVR LNVFRVRPGP
LVFALRGCRI AGADLREDVE VLTLVDQRPD HRDYRCVMGV LDRGAGRMHA YRASTVPEAR
ALVTGVQKAR QGIFEGNLLP TGCYTYTVGT HRAGTSGEIR GVLRLASTAT GAAEVVALRS
LQDVVYDRRD FWHRCAPADN IHPGRRREGF SSLGCLTLPG DYDRGSRSHS GLWADFRVAL
GMGRTFAASD DGRQFSVMLL TGADAALVAG LRGAPAEGLR RLRFGSTGAA VARLQAQMGL
APDRQRLVGP VTRAAFVALQ QRRLGWADGI LSPEMEADLG LDVFREGEE
|
|---|
| |