Gene Rsph17025_2412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2412 
Symbol 
ID5083644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2458662 
End bp2460068 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content69% 
IMG OID640483974 
Productglucuronate isomerase 
Protein accessionYP_001168605 
Protein GI146278446 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1904] Glucuronate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.632639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.286148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCTGC TGCACGCAGA TCGGCTGTTT CCGATCGAGG AGGGCGCCCG CGCGCTGGCC 
CGCGCGCTTC ACGGATCGGT CAAGGACCTG CCGATCGTCT CGCCGCACGG CCACACCGAT
CCCCGCTGGT TTGCAGAGAA CGAGGCTTTC CCCGATCCCG CCCAGCTTTT CGTGACGCCG
GACCATTATG TGTTTCGGAT GCTGCATTCG CAGGGCATCC CGCTGGAAGC GATGGGCGTG
CCGCGCGCCG ATGGCGGGCC GACCGAGACC GACGGCCGCA CGATCTGGCG GCTGTTCGCG
GCGAACTACC ACCTCTTTCG CGGCACGCCC TCGCGGCTGT GGCTGGATCA TGCCTTCTCG
GAGGTCTTCG GGCTGGAGCG CCGGCTCTCG GCCGGCACGG CGGATGCAAG CTATGACCAT
ATCGCCGACT GCCTGAGCCG GCCCGAGTTC CGGCCGCGCG CGCTGTTCGA GCGGTTCGGG
ATCGAGGTCA TCGCCACCAC GGAAAGCGCG CTCGACGACC TGCGTTGGCA CCGGATGATC
CGCGACAGCG GCTGGCAGGG CCGCGTCATC ACGGCCTATC GGCCCGATGC GGTGGTGGAT
CCCGAGTTCG CGGGCTTTGC CGGCAATGTG GCGGCATTGG GCGAGCTGAC GGGCGAGGAT
ACCGCGACCT GGCAGGGCTA TCTGGCGGCC CACCGCAAGC GGCGGGCGTA TTTCAAGGAG
TTCGGCGCGA CCTCGACCGA CCACGGCCAC GCCACGGCCC GGACCGAGGA TCTGCCGCAG
GCCGAGGCAG CGGCGCTTCT TGCCAAGGCG CTCAAGGGCA CCTGCACCCC CGACGAGGCC
GACGCCTTCC GTGGGCACAT GCTGACCGAG ATGGCGCGCA TGAGCCTCGA CGACGGGCTG
GTGCTGCAGA TCCATCCGGG CAGCTTCCGC AACCATTCTA AGCCGGTCAT GGATCGGTTC
GGGCGCGACA AGGGCTTTGA TATCCCGACC CGCACCGATT ACGTCCGCGC GCTGCGGCCG
CTTCTGTCGG CGGTGGGGGG CGATCCGCGG CTGACGGTGA TCGTCTTCAC GCTGGACGAA
ACCGCCTATG CCCGCGAACT GGCGCCGCTG GCCGGAGTCT ATCCGGCGCT GAAGCTTGGC
CCCGCCTGGT GGTTCCACGA CAGCCCCGAG GGGATGCGCC GCTTCCGCGA GATGACCACC
GAGACGGCCG GCTTCATGAA TACCGTGGGC TTCAACGACG ACACGCGCGC CTTCTGCTCG
ATCCCCGCCC GGCATGACGT GGCGCGGCGG GTGGACAGCG CGTTCCTGGC GACGCTGGTC
GCCACCGGGC GCCTCGATGA GGACGAGGCG TTCGAGGTGG CGCAGGACCT GGCCTACCGG
CTGGCGAAAC AGGCCTACCG GCTCTGA
 
Protein sequence
MGLLHADRLF PIEEGARALA RALHGSVKDL PIVSPHGHTD PRWFAENEAF PDPAQLFVTP 
DHYVFRMLHS QGIPLEAMGV PRADGGPTET DGRTIWRLFA ANYHLFRGTP SRLWLDHAFS
EVFGLERRLS AGTADASYDH IADCLSRPEF RPRALFERFG IEVIATTESA LDDLRWHRMI
RDSGWQGRVI TAYRPDAVVD PEFAGFAGNV AALGELTGED TATWQGYLAA HRKRRAYFKE
FGATSTDHGH ATARTEDLPQ AEAAALLAKA LKGTCTPDEA DAFRGHMLTE MARMSLDDGL
VLQIHPGSFR NHSKPVMDRF GRDKGFDIPT RTDYVRALRP LLSAVGGDPR LTVIVFTLDE
TAYARELAPL AGVYPALKLG PAWWFHDSPE GMRRFREMTT ETAGFMNTVG FNDDTRAFCS
IPARHDVARR VDSAFLATLV ATGRLDEDEA FEVAQDLAYR LAKQAYRL