| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2406 |
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| Symbol | |
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| ID | 5083638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 2453903 |
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| End bp | 2454628 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640483968 |
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| Product | 2-deoxy-D-gluconate 3-dehydrogenase |
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| Protein accession | YP_001168599 |
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| Protein GI | 146278440 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.358722 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCTCCT TCTCGCTGGC GGGCCAGCGG GCGCTGGTCA CGGGGGCCAA CACCGGGATC
GGTCAGGCAA TCGCGGTGGC ACTGGCCGAG GCCGGGGCCG AGGTGATCGC CGCCGGCCGC
TCCTCCTGCG CGGATACGGT GGCGCTGACC GGCGGGCGCG AGCTGCGGCT CGATTTCGCC
GACCCGATGG CCGCGCGGGA CGCCTTCGCG GCCGAACCCA TCGACATCCT CGTGAACAAT
GCCGGCATGA TCCGCCGTGC CGATGCGGTG GACTTCACCG AAGAGGACTG GGACGCGGTG
ATGGACGTGA ACCTCAAGGC CGTGTTCTTC ACCGCGCAGG CCTTCGCCCG CGCGGCGCTG
GCGCGGGGGA CGGGGGGGCG GATCATCAAC ATCGCCTCGC TTCTCAGCTT CCAGGGCGGC
ATCCGCGTGC CCTCCTACAC CGCAGCCAAG CATGGTGTGG CTGGCATCAC CAGGCTTCTG
GCGAACGAAT GGGCGGCGAA GGGCATCAAC GTGAACGCCA TCGCGCCGGG CTACATCGAG
ACCAACAACA CCGAGGCCCT GCGGGCCGAT GAGGCGCGCA ACCGCGCCAT CCTCGACCGC
ATCCCCGCCG GCCGCTGGGG CCGGCCCGAG GACATCGCCG GAGCGGCCGT GTTCCTCGCC
TCACCCGCTG CGGCCTATGT CCATGGCGCA ATCCTGAATG TCGATGGAGG CTGGCTTGCC
CGCTGA
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| Protein sequence | MISFSLAGQR ALVTGANTGI GQAIAVALAE AGAEVIAAGR SSCADTVALT GGRELRLDFA
DPMAARDAFA AEPIDILVNN AGMIRRADAV DFTEEDWDAV MDVNLKAVFF TAQAFARAAL
ARGTGGRIIN IASLLSFQGG IRVPSYTAAK HGVAGITRLL ANEWAAKGIN VNAIAPGYIE
TNNTEALRAD EARNRAILDR IPAGRWGRPE DIAGAAVFLA SPAAAYVHGA ILNVDGGWLA
R
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