Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2372 |
Symbol | alaS |
ID | 5083865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 2416937 |
End bp | 2419588 |
Gene Length | 2652 bp |
Protein Length | 883 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640483935 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_001168566 |
Protein GI | 146278407 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.726035 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.535692 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGTCCT TGAACGATAT CCGCTCGACC TTCCTCGACT ATTTCCGACG CAACGGGCAC AGGGTCGTGG AGTCGAGTCC GCTCGTCCCG CGCAACGACC CGACGCTCAT GTTCACGAAC TCGGGGATGG TGCAGTTCAA GAACTGCTTC ACCGGGCTTG AGCATCGTGA CTACACCCGG GCGACAACGG CGCAGAAGTG CGTCCGTGCG GGCGGCAAGC ACAATGACCT GGACAATGTG GGTTACACGG CCCGGCATCA CACCTTCTTC GAGATGCTGG GGAACTTCTC CTTCGGCGAC TATTTCAAGT CGGAGGCCAT CCCCTTCGCA TGGGAGCTTC TGACCAGGGA CTTCGATATC CCGCGGGAAA AGCTGCTCGT TACCGTCTAT CACACCGATG ACGAAGCCGC CTCGATCTGG AAGAAGGTGG CGGGCCTGCC GGATGACCGG ATCATTCGCA TCCCGACCAA CGACAATTTC TGGATGATGG GTCCCACGGG CCCGTGCGGT CCCTGCACCG AGATCTTCTA CGATCACGGT CCCTCGATCT GGGGCGGGCC GCCCGGCTCC GCGGATGAGG ATGGCGACCG GTTCATCGAG ATCTGGAACC TCGTCTTCAT GCAGAACGAG CAGCATCCCG ATGGGTCGAT GACGCCGCTG CCCAAGCAGT CGATCGACAC CGGGATGGGG CTCGAGCGGA TCGGCGCGCT CCTCCAGGGC AAGCATGACA ACTACGACAC CGACCTGATG CGCAGCCTGA TCGAGGCTTC GGCGCATGCG ACCTCGACCG ATCCGGATGG CACGGGCAAG ACTCACCACC GCGTCATTGC CGACCATCTC CGCTCGACCT CCTTCCTGAT CGCCGACGGC GTGATGCCGT CGAACGAGGG GCGCGGCTAT GTGCTGCGCC GGATCATGCG CCGCGCGATG CGTCATGCGC ATCTTCTGGG CGCACAGGAT CCTGTCATGC ACCGCCTGGT GCCCGCCCTG GTTCGGCAGA TGGGGGCCGC CTATCCCGAA CTGACCCGCG GTCAGGCGCT GATCGAGGAG ACGCTGAAGC TCGAGGAAAC CCGCTTCCGC CAGACGCTCG ACCGCGGTCT GCGGTTGCTT GAGGATGAAC TGGATCGTCT GCCGGAGGGC TCGCCGCTGC CGGGCGAGGC GGCCTTCAAG CTCTACGACA CCTACGGTTT TCCGCTCGAC CTGACGCAGG ACGCGCTCCG CGAAAAGGGG CGCAAGGTGG ATGTCGAGGG CTTCGAGGCG GCGATGGCCG AGCAGAAGGC CAAGGCTCGC GCCAGCTGGT CCGGCTCGGG TGAGACCAAG GATGCGGCGA TCTGGTTCGA TCTGGCCGAA AGGCACGGGG CGACCGAATT CCTGGGCTAT GATACGGAAA AGGCCGAGGG GCAGATCCTC GCGATCGTTG CGGGCGGGGT GGATACCGCT TCGGCCACGC CCGGTCAGAC GGTTCAGATC ATCCTCAACC AGACCCCCTT CTACGCCGAA TCCGGCGGTC AGGTCGGGGA CACGGGTGAG TTGCGAACCG ACACCGGCCG GGCCCGGATC ACGGATGTCA GAAAGGGTCA GGGGCTCTTC CTGCATTTTG CCGAAGTGAC GGAGGGCGAG ATCCGGCCGG GTCAGGGCGC GGCGCTCGAG GTGGATCACG CCCGGCGTTC GGCGATCCGG GCGAACCACT CGGCCACCCA CCTCCTGCAC GAGGCGCTCC GGCGGGCGCT CGGTGATCAT GTCGCGCAGC GGGGCTCTCT GAATGCTCCC GACCGGCTAC GCTTCGACTT CAGCCACTCC AAGGCGCTCA GCGCCGAGGA ACTGGCCACG GTCGAGGCCG AGGTGAACCA GTTCATCCGC TCGAACGGAA TGGTCGAGAC GCGGATCATG TCGCCCGACG ACGCGCGGGC GCTCGGCGCC CAGGCGCTCT TCGGCGAGAA ATATGGCGAC GAGGTGCGCG TGGTCTCGAT GGGCACGCTC GCCGGCTCGG GCAAGGGCAT GGACGGCCAG ACCTATTCGC TGGAGCTGTG CGGTGGCACG CATGTGGCGC GGCTGGGCGA CATCGGTCTG TGCGTGATCC TCGGCGATTC GGCTTCGTCC GCCGGTGTGC GTCGGATCGA GGCGCTGACC GGGGAGGGCG CGCTGGCCCA TCTCAACGAG CAGATGCAGC GGCTGGCCGA GGTGGCGGCC ACTCTGAAGG CGTCGCCAGC CGAGATGGTG GACCGCGTCA AGGCGCTGGT CGAAGAGCGT CGGCAGCTTC AGAACGAGGT GGCGCAGCTG CGTCGTGAGG CGGCCATGGG CGGCGGTGCC GCCGCCGAGG CCAAGGACAT CGGCGGCGTG AAGTTTCTGG CCCAGATCGT CCAGGGGGTG CCGGGCAAGG ACATGCCGGG GCTCATCGAC GAGATGAAGG CGCGCGTGGG CTCGGGCGCC GTGCTCCTGA TCTCGGACAC CGCCGGCAAG GCGGCACTGG CCGCCGGTGT CACGCCGGAC CTGACCGACC GGCTGTCCGC GGTGGCGCTG GTCAAGGCCG CGGCCGAGGC GCTCGGCGGG CGCGGCGGCG GCGGGAGGCC GGACATGGCG CAGGCGGGCG CGGCCGACGC GTCTCAGGCC GAGGCGGCGA TCCGCGCGGT TGAAGCGGTG ATCGGAGGCT GA
|
Protein sequence | MPSLNDIRST FLDYFRRNGH RVVESSPLVP RNDPTLMFTN SGMVQFKNCF TGLEHRDYTR ATTAQKCVRA GGKHNDLDNV GYTARHHTFF EMLGNFSFGD YFKSEAIPFA WELLTRDFDI PREKLLVTVY HTDDEAASIW KKVAGLPDDR IIRIPTNDNF WMMGPTGPCG PCTEIFYDHG PSIWGGPPGS ADEDGDRFIE IWNLVFMQNE QHPDGSMTPL PKQSIDTGMG LERIGALLQG KHDNYDTDLM RSLIEASAHA TSTDPDGTGK THHRVIADHL RSTSFLIADG VMPSNEGRGY VLRRIMRRAM RHAHLLGAQD PVMHRLVPAL VRQMGAAYPE LTRGQALIEE TLKLEETRFR QTLDRGLRLL EDELDRLPEG SPLPGEAAFK LYDTYGFPLD LTQDALREKG RKVDVEGFEA AMAEQKAKAR ASWSGSGETK DAAIWFDLAE RHGATEFLGY DTEKAEGQIL AIVAGGVDTA SATPGQTVQI ILNQTPFYAE SGGQVGDTGE LRTDTGRARI TDVRKGQGLF LHFAEVTEGE IRPGQGAALE VDHARRSAIR ANHSATHLLH EALRRALGDH VAQRGSLNAP DRLRFDFSHS KALSAEELAT VEAEVNQFIR SNGMVETRIM SPDDARALGA QALFGEKYGD EVRVVSMGTL AGSGKGMDGQ TYSLELCGGT HVARLGDIGL CVILGDSASS AGVRRIEALT GEGALAHLNE QMQRLAEVAA TLKASPAEMV DRVKALVEER RQLQNEVAQL RREAAMGGGA AAEAKDIGGV KFLAQIVQGV PGKDMPGLID EMKARVGSGA VLLISDTAGK AALAAGVTPD LTDRLSAVAL VKAAAEALGG RGGGGRPDMA QAGAADASQA EAAIRAVEAV IGG
|
| |