Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2367 |
Symbol | |
ID | 5083860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 2411716 |
End bp | 2412930 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640483930 |
Product | isocitrate dehydrogenase |
Protein accession | YP_001168561 |
Protein GI | 146278402 |
COG category | [C] Energy production and conversion |
COG ID | [COG0538] Isocitrate dehydrogenases |
TIGRFAM ID | [TIGR00127] isocitrate dehydrogenase, NADP-dependent, eukaryotic type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.666765 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAAGA TCAAGGTAGC CAACCCCGTC GTCGAACTCG ACGGCGACGA GATGACCCGC ATCATCTGGG ACTTCATCAA GCAGAAGCTG ATCCTGCCCT ACCTCGACAT CGACCTGCAT TACTACGACC TCGGCATCGA GGAGCGCGAC CGCACCGAGG ACCAGATCAC CGTCGATGCG GCGAACGCGA TCAAGCAATA CGGCGTCGGC GTGAAATGCG CGACCATCAC CCCCGACGAG GCCCGGGTCG AGGAATTCGG CCTGAAGCAG ATGTGGAAGT CCCCGAACGG CACCATCCGC AACATCCTCG GCGGGGTGAT CTTCCGCCAG CCGATCATCT GCAAGAACGT GCCGCGCCTC GTGCCGGGCT GGACGAAGCC GATCGTCGTC GGCCGCCACG CCTTCGGCGA CCAGTACCGC GCCACCGACT TCCGCTTCCC CGGCAAGGGC AAGCTCACGC TCAAGTTCGT GGGCGAGGAC GGCACGGTGA TCGAGCGCGA GGTCTTTGAC GCCCCCGGTG CCGGCGTGAC CATGGCGATG TACAACCTCG ACGAGTCGAT CCTCGACTTC GCGCGGGCCT CGATGAACTA CGGGCTGAAC CTCGGCTGGC CGGTGTATCT GTCCACCAAG AACACCATCC TCAAGGCCTA TGACGGCCGC TTCAAGGACC TCTTCCAGAA GGTCTATGAG GAGGAATTCG CCGACAGGTT CAAGGCCGCG GGCATCACCT ACGAGCACCG GCTGATCGAC GACATGGTGG CCTCGGCGCT GAAATGGTCG GGCGGCTATG TCTGGGCCTG CAAGAACTAC GATGGCGACG TGCAGTCGGA CACGGTGGCG CAGGGCTTCG GCTCGCTCGG GCTGATGACG AGCGTGCTGA TGACGCCGGA CGGCAAGACG GTGGAGGCCG AGGCCGCGCA TGGCACGGTG ACGCGGCACT ACCGCCAGCA CCAGGCGGGC AAGGAGACCT CGACCAACTC CATCGCCTCG ATCTTTGCCT GGACGGGCGG GCTCAAGCAC CGCGCGAAGC TCGACGACAA CGCGGAACTC ATGCGCTTCG CCGAGACGCT GGAGCGGGTG ACGGTGCAGG CGGTCGAGGA CGGGTTCATG ACCAAGGACC TCGCGCTGCT GGTGGGGCCG GACCAGAAGT GGCTGACGAC GATGGGCTAT CTGGAGAAGG TGGACGAATA TCTCGACCGC GCCCTCGGCG CCTGA
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Protein sequence | MSKIKVANPV VELDGDEMTR IIWDFIKQKL ILPYLDIDLH YYDLGIEERD RTEDQITVDA ANAIKQYGVG VKCATITPDE ARVEEFGLKQ MWKSPNGTIR NILGGVIFRQ PIICKNVPRL VPGWTKPIVV GRHAFGDQYR ATDFRFPGKG KLTLKFVGED GTVIEREVFD APGAGVTMAM YNLDESILDF ARASMNYGLN LGWPVYLSTK NTILKAYDGR FKDLFQKVYE EEFADRFKAA GITYEHRLID DMVASALKWS GGYVWACKNY DGDVQSDTVA QGFGSLGLMT SVLMTPDGKT VEAEAAHGTV TRHYRQHQAG KETSTNSIAS IFAWTGGLKH RAKLDDNAEL MRFAETLERV TVQAVEDGFM TKDLALLVGP DQKWLTTMGY LEKVDEYLDR ALGA
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