Gene Rsph17025_2350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2350 
Symbol 
ID5083843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2394240 
End bp2396738 
Gene Length2499 bp 
Protein Length832 aa 
Translation table11 
GC content69% 
IMG OID640483913 
Productcyclic nucleotide-binding protein 
Protein accessionYP_001168544 
Protein GI146278385 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters
[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTG TCCTGCTCGT CACGGCCCTG GCGGCCCTGT TCATCGTGAT CGCCGCCTGC 
GAGCCCGTCG CCGCGCGGCT CAGGCTGCCC TATACGGTGG TGCTGGCCGT GGTCGGAGCG
GCGCTCGGCA CGCTCGCGCT CTGGCTCCAG CGCAGCGGCG TGGCGGCCAC CTTCCCGCCC
GAGGTGGCCG AGTTGCTCTC GCTGCCGATC CGCTCGAGCG TCTTCCTCTT CATGTTCCTG
CCGACGTTGC TGTTCCAGGT CTCGCTGAGC CTGAACATCC GGCGGATGAT CGACGACTGG
GTGCCGATCC TCGTGATGGC CGTGGTGGCG GTGCTGGTCT CGACGCTGGC CATCGGCTTT
GCGCTGCAGC CCTTCAGCTC GATGTCGCTG GCCGCCTGCC TGTTGCTCGG CGCCATCGTC
TCGACCACCG ATCCTTCCGC GGTCGTCTCG ATCTTCCGCT CGATCGCCGC CCCGCAGCGG
CTGACGCGGA TCGTCGAGGG CGAGAGCCTG CTGAACGACG CCGCGGCCAT CGCGCTCTTC
GGCTTTTTCC TGACCTTCGT CATGGCCGGC GTGCCCGATC CGACGCTGCG CGACGCGGTC
GTCCAGTTTC CGCTGCTGAT CGTCGGAGGG GTCGCGCTCG GCTATGGCAT GGCCCGCGTC
GCCCTGTCGC TGATGACGCG CATGGCGTCC TACCCCACGG CGCAACTCTC GCTCAGTCTC
GCGCTGCCCT ACCTCACCTA TGTCCTGGCC GAGCAGGGGC TTCAGGTCTC GGGCGTGATC
GCGGTGGTGA CGGCGGGGAT CGCCATGAAC CTCGCAGGCC CCGGACGCCT CAGCCCCGCC
ACCTGGAAGC TTCTCAGCGA CACATGGGAG ATGCTCTCGC ACTGGGCGGG CTCCCTCATC
TTCATCGTGG CGGCGCTCCT CATCCCGCGG CTGATCGGGC GCGCGACGGA ATGGGATCTC
GTGCTGATCG GGGTGGTTGC GCTGGCGGCG ATCGTGGCGC GGGCGGTGAT GCTGTCGGGG
CTGCTGCCGC TTCTGACCCG GCTCAACCTC TCGCCCAAGG TCGAGCGGCC CTACCGCGTG
GCGATCCTCT GGGGCGGGCT GCGGGGCGCC GTGACGCTGG CGTTGGCGCT GGCGGTGACC
GAGAACCCGA TGGTGCCGCC GCATGTGAAG CGCGAGGTGG GCATCCTCGC CACCGGATTT
GTCCTGTTCA CGCTGATGGC GCAGGGCACC ACGCTCCGGT GGGTGATCCG GCGGCTCGGC
CTCGCGCGGC TGACTCCGCT CGATCTGGCG CTTTCGAACC AGGTGATCGC CGTCGCGCTG
CAGAACGTCC GCGAGGAAGT GGCCGCCACC GTGCGTGAGC GCGAGCTTGA CCCCCAGATC
GTGCGCGCCG AGGCCAAGAG CTTCGGCCAG AGGCTGACCC GCGCGGTGGA GCTGGCCGAT
GACAGCGCCG ACGACATCCC GGACCGCGAC CGGATCACGC TGGGGCTCCT GGCGCTGGCG
GGGCGCGAGC GGGATGCGAT CCTGGCCTCC TTCCGCCAGC AGATCATCCC GCCCCGCCTC
GCCGAGGCGA TGCTGGTCGA TGTGGACCGC CTGATCGAAC GGACGCGCCT TCAGGGCCGC
GACGGCTACC GCTCGGCCGG CCGGCTCGCG CTCGGCTACG GGCGGCGGCA TCGGGTGGCG
GTCTGGGCCC ACAACCGGCT GAAGATCTCG CGCTGGCTGA GCCAGCTCAC CTCTGACCGG
TTCGAGATGC TGCTGACCCA GCGGCTGATC CTCGGTGACC TGCACAAGCT GATCGACGGC
AAGATCCGCC GCATCCACGG CCGTCGGGTG GCCGAGATCC TGCATGAGAT GCTCAAGCGC
CGCGAGGATG AGACCGAGCA GGCGCTCGAG GCGCTGCGCC TGCAATATCC GGGCTATTCC
GGCGAGATGG TGCGCAGCTT CATCCGCCGG ACCGCGCTGC AGCTGGAACT GCGCGAATAC
GAGACGCTGC GCGATGACGG CCTCATCGGG CAGGAGCTGT TCATGACGCT GCGCCAGCGC
ATCCAGATCG CGCGCGGCAA GAAGGAGCGG CGGCCGCGGC TCGATTTCGC GCTGCAGAAA
TCCGAGCTGG TGCGCCAGTT CCCGCTCTTT GCCGAGATGG AAGAGGATCA GCTGCGCGTG
CTCGAGCGGC TGCTGCAGAC GGTCTATGTC CGGCCGGGGG ATGTGCTCCT GCGCCGGGGC
GACGTGCCGC GCAAGGTCTT CTTCATCGCG TCCGGCGCCG TGGAATCCGA TGTGGCGGGG
CAGAAGGTGC GCCTCGGGCG CGGCGAGATG TTCGGCCAGC TCGCGATCCT GACCCGCAAG
GCCCGCCGCG CCCAGGTGAC CGCGATCAGC CACGGCACGC TCCTGAGCCT CGACGAGACC
CGTTTCCTGG AACTCCTGCG CCGCAACAAG GCGCTGCAGC AGGCCGCGGT GGACAGCGCC
GCGCGCCGCA ACGTGACCAT CGACCTCAGC GCGACCTGA
 
Protein sequence
MTIVLLVTAL AALFIVIAAC EPVAARLRLP YTVVLAVVGA ALGTLALWLQ RSGVAATFPP 
EVAELLSLPI RSSVFLFMFL PTLLFQVSLS LNIRRMIDDW VPILVMAVVA VLVSTLAIGF
ALQPFSSMSL AACLLLGAIV STTDPSAVVS IFRSIAAPQR LTRIVEGESL LNDAAAIALF
GFFLTFVMAG VPDPTLRDAV VQFPLLIVGG VALGYGMARV ALSLMTRMAS YPTAQLSLSL
ALPYLTYVLA EQGLQVSGVI AVVTAGIAMN LAGPGRLSPA TWKLLSDTWE MLSHWAGSLI
FIVAALLIPR LIGRATEWDL VLIGVVALAA IVARAVMLSG LLPLLTRLNL SPKVERPYRV
AILWGGLRGA VTLALALAVT ENPMVPPHVK REVGILATGF VLFTLMAQGT TLRWVIRRLG
LARLTPLDLA LSNQVIAVAL QNVREEVAAT VRERELDPQI VRAEAKSFGQ RLTRAVELAD
DSADDIPDRD RITLGLLALA GRERDAILAS FRQQIIPPRL AEAMLVDVDR LIERTRLQGR
DGYRSAGRLA LGYGRRHRVA VWAHNRLKIS RWLSQLTSDR FEMLLTQRLI LGDLHKLIDG
KIRRIHGRRV AEILHEMLKR REDETEQALE ALRLQYPGYS GEMVRSFIRR TALQLELREY
ETLRDDGLIG QELFMTLRQR IQIARGKKER RPRLDFALQK SELVRQFPLF AEMEEDQLRV
LERLLQTVYV RPGDVLLRRG DVPRKVFFIA SGAVESDVAG QKVRLGRGEM FGQLAILTRK
ARRAQVTAIS HGTLLSLDET RFLELLRRNK ALQQAAVDSA ARRNVTIDLS AT