Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2337 |
Symbol | |
ID | 5084987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 2384212 |
End bp | 2385597 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640483900 |
Product | response regulator receiver modulated diguanylate cyclase |
Protein accession | YP_001168531 |
Protein GI | 146278372 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.114554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGGGA AGGTTCTTAT TGCGGACAAT GTTGCGACGA ACCGCATCGT CCTCAAGGTC AAGCTGGCGG CGGCGTGCTA CCGTCCGCTT CTGGCGGGCG ACGGGGCCTC ATGCCTGGCA ATGGCGCGGG CGGAGATCCC CGACCTCATC CTTCTCGACT GCAGCCTGCC GGACCTGGAC GGGATCGAGG TGCTGCGCCG GCTGCGCAGG GACCCGGTCA CCCGCGACAT CCCGGTGATC ATGATCTCGG CCTCGCGCGA TGCCGGGATC CGGCTCGAGG CGCTGGCCGA GGGGGCGGAC GATTACATGG CCAAGCCGGT GGACGATCTG GTGCTGATGG CGCGGCTGCG GCGGCTGATG CGGCTGCGCG ACACGCCCGG AGAGGGGGCG ATCCGCGGCG CGGCGCTCCG GGCACTCGGC CTTGCCGAGC AGGCGGAGGC CTTCGAGGGA CCGGGGCTGA TCGCGCTGGT TGCCGGCCGG ACCGAACTTG CGATGCGCTG GCGGAAGGAG CTGCAGGCGC TGATGCCGGA CCGCCTCTTG GTCCAGAGCC GCGAGGAGGC GCTGGCCGAG GGCGGCACCA CCCCCGACAT CTTCCTGATC GATGCCGACC TCGACGGCCC CGGGGGCGGG CTGCGGCTCA TGTCCGACCT GCGCAGCCGG GCCGGGACGC GGCACGCGGC CGTCTGCATC GTCCGGGGCG AGGTGGCGGG CGAAGGCGCC GCGATGGCCT ATGACCTCGG CGCGAACGAC CTGTTGCCGG CGGCCTTCGA CCCGCGCGAG GCCCGGCTCC GGCTGAGGAA CCTCCTGCGC CGCAAGCGCC GGGCCGACGC CACGCGGGCC ACCCTGCAGA ACGGGCTGCG CCTTGCGGTC GTCGATCCGC TGACGGGGCT CTACAACCGC CGCTATGCCG GCGCGCATCT GGCGGCGGTG GCCGAGAGGG CGCAGGCGGC CGGCGAGCGG TTCGCGGTGA TGGTGATCGA TCTTGACCGC TTCAAGTCGG TGAACGACCG CTGGGGCCAC GGGGCGGGTG ACGCCGTGCT GGTCGAGGTG GCGCGGCGGC TTCACGCCAA CCTCCGCCCC GGCGACCTGA TCGCCCGGAT CGGCGGCGAG GAGTTTCTGG TGGCCCTGCC CGACGTCCGG CGGCCCGACG AGGCCCGCGC GGTGGCTGAA CGGCTGCGCG AGGCCATCGA GGAACAGCCC GTGAGCCTCC CCTGCGGCGG CAGCCTGCGG GTGACGATCT CGGTCGGTCT CGCCTTCTCG CTGGATGACG GGGGGCGCCG GGTCGAGACG GTGGATCAAG TGGTCAACCG CGCCGACAGC GCGCTTCTGA TCGCGAAATC GGGCGGGCGG AACCAGGTCA CGATCGAGCG AAGCGCCGTG GCCTGA
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Protein sequence | MGGKVLIADN VATNRIVLKV KLAAACYRPL LAGDGASCLA MARAEIPDLI LLDCSLPDLD GIEVLRRLRR DPVTRDIPVI MISASRDAGI RLEALAEGAD DYMAKPVDDL VLMARLRRLM RLRDTPGEGA IRGAALRALG LAEQAEAFEG PGLIALVAGR TELAMRWRKE LQALMPDRLL VQSREEALAE GGTTPDIFLI DADLDGPGGG LRLMSDLRSR AGTRHAAVCI VRGEVAGEGA AMAYDLGAND LLPAAFDPRE ARLRLRNLLR RKRRADATRA TLQNGLRLAV VDPLTGLYNR RYAGAHLAAV AERAQAAGER FAVMVIDLDR FKSVNDRWGH GAGDAVLVEV ARRLHANLRP GDLIARIGGE EFLVALPDVR RPDEARAVAE RLREAIEEQP VSLPCGGSLR VTISVGLAFS LDDGGRRVET VDQVVNRADS ALLIAKSGGR NQVTIERSAV A
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