| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2329 |
|---|
| Symbol | |
|---|
| ID | 5084979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 2376023 |
|---|
| End bp | 2377018 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640483892 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
|---|
| Protein accession | YP_001168523 |
|---|
| Protein GI | 146278364 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.290607 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGACGTCG CCATCTTCAG CGCCAAGCCC TATGACCGCC AGTTCCTGAC CGCCGCGAAC
GAGGACCGTC ACCGGCTGGC CTTCATCGAG GCGCGCCTGT CCGAAGAGAC GGTGCGCTTT
GCGGGCGGGG CCGAGTGCAT CTGCGCCTTC GTGAACGATC AGGTGACGGC GCCCGTCGTC
ACCGAGCTTG CCGCGGCGGG GACCCGGCTG ATCGCGTTGC GCTCGGCCGG CTTCAACCAT
GTGGATCTGG TGGCGGCCGA GGCTGCGGGC CTGACGGTCG GGCGGGTGCC GGCCTATTCG
CCCCATGCGG TGGCCGAACA TGCGGTCGCG CTGATCCTGA CGCTGAACCG CAACACGCAC
CGCGCCTTCA ACCGGGTGCG CGAGGGCAAT TTCGCGCTCG AGGGGCTGCT GGGTTTCGAC
CTGTGCGGAA AGACGGTCGG CGTCGTGGGG ACGGGTCTCA TCGGGCGCAC CTTCGCGGGC
ATCATGCGCG GCTTCGGCTG CCGGGTGATC GCCTCCGACC CCTATCCGTC CGACGAATGC
GCGGCCATGG GCGTGACCTA TGTGCCGCTC GAGCAGCTCT TTGCCGAGGC CGACATCATC
AGCCTGCAAT GTCCCCTGAC GCCCGACACG CACCACCTGA TCGACGACCG CGCCATCGGG
CTGATGAAGC GCGGGGTGAT GATCGTGAAC ACGAGCCGCG GCGCCGTCGT GGATGCCAGC
GCGGTGATCC GGGGCCTCAA GAGCGGCGTG ATCGGCGGGC TTGCCCTCGA TGTCTATGAG
GAGGAGGCCG ATCTCTTCTT CGAGGATCTC TCGCAGAAGG CCATCCAGGA CGATGTCTTC
GCGCGTCTGC TGACCTTTCC GAACGTGCTG ATCACCGGCC ATCAGGCCTT CTTCACCCGC
GAGGCGCTGA CCGGCATCGC CCGGACGACG ATCGACAACA TCAACGCCTT CGAGGACACG
GGCCGCGTTC TCCATCCCGT GCTGGCGCCG CGCTGA
|
|---|
| Protein sequence | MDVAIFSAKP YDRQFLTAAN EDRHRLAFIE ARLSEETVRF AGGAECICAF VNDQVTAPVV
TELAAAGTRL IALRSAGFNH VDLVAAEAAG LTVGRVPAYS PHAVAEHAVA LILTLNRNTH
RAFNRVREGN FALEGLLGFD LCGKTVGVVG TGLIGRTFAG IMRGFGCRVI ASDPYPSDEC
AAMGVTYVPL EQLFAEADII SLQCPLTPDT HHLIDDRAIG LMKRGVMIVN TSRGAVVDAS
AVIRGLKSGV IGGLALDVYE EEADLFFEDL SQKAIQDDVF ARLLTFPNVL ITGHQAFFTR
EALTGIARTT IDNINAFEDT GRVLHPVLAP R
|
|---|
| |