| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2316 |
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| Symbol | |
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| ID | 5084966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 2359657 |
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| End bp | 2362299 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640483879 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001168510 |
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| Protein GI | 146278351 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTCG TCGTCGTCGA AAGCCCGGCC AAGGCCAAGA CTATCAACAA ATACCTGGGC
TCCGACTATA CGGTTCTGGC CTCCTACGGG CATGTCCGCG ACCTGCCGGC CAAGGATGGA
TCGGTCGATA CCGAGCATGA GTTTGCCATG ACCTGGGAGG TTGCGGCCGA CTCGAAGAAA
CACGTCCGCG CGATCGCCGA GGCGCTGAAG ACCGATGACA CGCTGATCCT CGCCACCGAC
CCCGACCGCG AGGGCGAGGC GATCTCGTGG CACCTGCAGG AGGCGCTGGC CTCGTCGCTG
AAGAAGGGCA AGACCGTCAG CCGGGTGACC TTCAACGCGA TCACCAAGGC CGCGGTGACC
GAGGCGATGA AGGCGCCGCG GCAGGTCGAT ACGGCGCTGG TCGAGGCCTA TCTCGCCCGC
CGCGCGCTGG ATTATCTGGT GGGCTTCACG CTGTCCCCGG TGCTCTGGCG CAAGCTGCCG
GGGGCGAAAT CGGCGGGCCG GGTGCAGTCG GTCTGCCTGC GGCTGATCGT CGAGCGCGAG
ATGGAGATCG AGGCCTTCCG CGCCCGCGAG TTCTGGACCG TCTCGGCCGT GCTCGTCACC
CCGCGCGGGC AGGAGTTCGA GGCGCGTCTG ACCGTTCTGG GCGGCAAGAA GCTCGACAAG
TTCGACCTGC CCACGGCCGA GGCCGCGGAA CTGGCGGTGC AGGCCGTGAC CTCACGGCCC
CTCAAGGTCG CCTCGGTCGA GGCCAAGCCC GCCAGCCGCA ACCCGTCCGC GCCCTTCATG
ACCTCGACCC TGCAGCAGGA GGCCAGCCGC AAGTTCGGCA TGGGCGCGAA ACAGTGCATG
TCGGCGGCGC AACGGCTCTA TGAGGCCGGC CACATCACCT ACATGCGGAC GGACGGCATC
GACATGGCGC CCGAGGCCGT CATGGCCGCG CGCGACGAGA TCAAGCGGCG GTTCGGGGCG
GACTATGTCC CCGACAGCCC CCGCATGTAC AAGAACAAGG CCAAGAACGC GCAGGAAGCC
CACGAGTGCA TCCGGCCCAC CGACATGTCG GCCTCGCCCG AGAAGCTGGG CCTGACCGAC
GCCGACCAGC GCAAGCTTTA CGAACTGATC TGGAAGCGGA CGCTGGCCAG CCAGATGGCG
GCCGCCCGGC TGGAGCGGAC CACGGTCGAG ATCGCAAGCC CGGACGGGCA GGTGGGGCTG
CGCGCGACGG GGCAGGTCGT GCTCTTCGAC GGCTTCCTCA AGGTCTATGA GGAAGGCCGC
GACGACCGCG GCGAGGGCGA CGAGGACGAG GGCCGCCTGC CGCAGATCAT GGCAAACGAG
GCGGTGGACA AGAAGTCCAT CACGCCCGAG CAGCACCACA CCCAGCCGCC GCCGCGCTAT
ACCGAGGCCA CTCTGGTCAA GCGGATGGAG GAACTTGGCA TCGGCCGGCC TTCGACCTAT
GCCAGCATCG TCTCGACGAT CCAGGACCGG GAGTATGTGC GGAAGGACAA GAACCGGCTG
ATTCCCGAGG ACAAGGGGCG GCTGGTGACA GCCTTCCTTG CGAACTTCTT CCGCAAATAT
GTCGAATACG ATTTCACCGC CGATCTGGAA GGCGAGCTTG ACGACGTCTC GGCCGGCGAG
CGGAACTACA AGGAAGTGCT GGCGCGGTTC TGGCGCGATT TCTCGGCGGC GGTGGCGGAA
ACGGCCGATC TGCGTATCGG CGAGGTGCTC GACAAGCTCG ACGATTTCCT CGCGCCCCAT
CTCTACCCGC CGCGGCCCGA CGGGTCCGAT CCCCGGATCT GCCCGACCTG CGGCTCGGGG
CGTCTGCATC TGAAGACGGC GCGGGGCGGC GGGGCCTTCA TCGGCTGCGG GAACTACCCG
GAATGTCGCT ACACGCGGCC GATCTCGGTC ACGGGCGATG AGGACAACGC GATCTCGCCC
GATGGCAAGC TCCTTGGTCA TGACGAGGAT GGCCAGCCGA TCACGCTGCG CTCGGGCCGG
TTCGGTCCTT ACGTGCAGAG GGGCGAGGCG ACGGCCGAGG TGCCGAAGCC GCCGAGGGCC
AGCCTGCCCA AGGGCTGGGC GCCGGACTCG GTCGATCTCG AGCGGGCGCG GATGCTGCTG
AACCTGCCTC GGCTGGTCGG GCAGCACCCC GAGGACGGTC AGCCGGTCGA GGCTGCGATC
GGCCGCTACG GACCTTACGT CAAGCACGGC TCGACCTATG CGAATCTGCC CGATGTCGAG
GACGTCTTCA CCATCGGCAT GAACCGCGCC GTCGAGGTTC TGGCGCAGAA GGCCGCCGGC
CGGCGCGGCG CCTCGGCTCC GGCGCAGCCG ATCAAGGAGT TGGGCGAGCA TCCCGACGGC
GGAGTTCTGG CCGTGATGCC GGGGCGTTAC GGGCCGTACG TCAAGTGGGG CAAGGTGAAC
GCGACCCTGC CGAAGGGGGT CGAGCCCGAG GCGATCACCC TTGAGGAGGC TCTTGCGCTG
GTGGCCGAGA AGGCGGGCAA GGCGCCGAAG AAGAAGGCAC CCGCCCGGAA GGCCGCCAAG
GCCGAGGGAG AGCCGAAGAA GGCCGCCAAG GCCGAGGGCG AGGCGAAGAA GGCCGCGGCC
AAGAAGGCGG CCCCGAAGGC CTCTGGGAAG AAAAAGACGG CGCCGGACAC CGACGCCGCC
TGA
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| Protein sequence | MAVVVVESPA KAKTINKYLG SDYTVLASYG HVRDLPAKDG SVDTEHEFAM TWEVAADSKK
HVRAIAEALK TDDTLILATD PDREGEAISW HLQEALASSL KKGKTVSRVT FNAITKAAVT
EAMKAPRQVD TALVEAYLAR RALDYLVGFT LSPVLWRKLP GAKSAGRVQS VCLRLIVERE
MEIEAFRARE FWTVSAVLVT PRGQEFEARL TVLGGKKLDK FDLPTAEAAE LAVQAVTSRP
LKVASVEAKP ASRNPSAPFM TSTLQQEASR KFGMGAKQCM SAAQRLYEAG HITYMRTDGI
DMAPEAVMAA RDEIKRRFGA DYVPDSPRMY KNKAKNAQEA HECIRPTDMS ASPEKLGLTD
ADQRKLYELI WKRTLASQMA AARLERTTVE IASPDGQVGL RATGQVVLFD GFLKVYEEGR
DDRGEGDEDE GRLPQIMANE AVDKKSITPE QHHTQPPPRY TEATLVKRME ELGIGRPSTY
ASIVSTIQDR EYVRKDKNRL IPEDKGRLVT AFLANFFRKY VEYDFTADLE GELDDVSAGE
RNYKEVLARF WRDFSAAVAE TADLRIGEVL DKLDDFLAPH LYPPRPDGSD PRICPTCGSG
RLHLKTARGG GAFIGCGNYP ECRYTRPISV TGDEDNAISP DGKLLGHDED GQPITLRSGR
FGPYVQRGEA TAEVPKPPRA SLPKGWAPDS VDLERARMLL NLPRLVGQHP EDGQPVEAAI
GRYGPYVKHG STYANLPDVE DVFTIGMNRA VEVLAQKAAG RRGASAPAQP IKELGEHPDG
GVLAVMPGRY GPYVKWGKVN ATLPKGVEPE AITLEEALAL VAEKAGKAPK KKAPARKAAK
AEGEPKKAAK AEGEAKKAAA KKAAPKASGK KKTAPDTDAA
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