Gene Rsph17025_2280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2280 
Symbol 
ID5083700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2319465 
End bp2320073 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content75% 
IMG OID640483844 
Productpeptidase M22, glycoprotease 
Protein accessionYP_001168475 
Protein GI146278316 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.374361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.567349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGGCCTG AGCCGAGGAT CCTGGCCTTC GACACGTCGG CCGCGCATTG CGCGGCCGCA 
TTGCTTTCGG GCGACCGTCT GGTGGCAGGC CGGCTCGAGC CGATGGAGAA GGGCCAGGCC
GAGCGGCTGA TGCCGCTTCT GGCGGAGCTG CTGGTCGAGG GTGGGATGGG CTGGACCGAT
CTGGACGCGC TGGCGGTGGG CACGGGGCCC GGCAATTTCA CCGGCGTGCG GATCGCGGTC
GCCGCGGCGC GGGGGCTTGC GCTGGCGCTC GGGCGGCCCG CGCTGGGGGT CTCGCGCTTC
GAGGCGCTGG CGCTGGGGCT GGCCGGGCCC GTCGCGGTGA TCGAGGATGC CCGGCGGGAC
GAGGTCTATC TGAAGGATGG GGAGGCGCCG GCCCGGCTGG TCGCGCGCAC GGGGCTGCAG
GTGGCGGCGC GCCGGCAGGT GGGCAGTGCG GCCTTTGCGG ATGTGGTGGC CCCGCTCTAC
CCGCTGGCCG AGGCCATCGG CCGCGTGGCG CTCGCCCGAG TGGGGGAGCC GCAACCGCGG
CCGGCTCCGT TCTATCTGCG CGGGGCGGAT GCGGCTCCCG CGGCCGATCC CCCGCCGGTG
ATCCTGTGA
 
Protein sequence
MRPEPRILAF DTSAAHCAAA LLSGDRLVAG RLEPMEKGQA ERLMPLLAEL LVEGGMGWTD 
LDALAVGTGP GNFTGVRIAV AAARGLALAL GRPALGVSRF EALALGLAGP VAVIEDARRD
EVYLKDGEAP ARLVARTGLQ VAARRQVGSA AFADVVAPLY PLAEAIGRVA LARVGEPQPR
PAPFYLRGAD AAPAADPPPV IL