Gene Rsph17025_2279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2279 
Symbol 
ID5083699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2318915 
End bp2319475 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content68% 
IMG OID640483843 
ProductNifU domain-containing protein 
Protein accessionYP_001168474 
Protein GI146278315 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0694] Thioredoxin-like proteins and domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.473385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.588083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCATCC AGACCGAATC CACGCCGAAC CCGGCGACGC TGAAGTTTCT GCCCGGCCAG 
ATGGTGCTGG AGGCGGGCAC CGCGGATTTC GCAAGCGCCG AGGCGGCGGC GACATCCCCG
CTTGCGCGGC GGATCTTCGG CGCCGGCGGT GTGGCCTCGG TCTTCTTCGG CACGGACTTC
ATCGCCGTGA CCAAGGAGGA CGAGGTCGTC TGGGACCATG TGAAGCCGGC GATCCTCGGC
GCCATCATGG AGCACTACCA GTCGGGGGCG CCGGTGCTCG AGGGCGAGCA GGCGGCCTCG
GGTCATGCGA CCCATGACGG GCCGGACGAG GAGATCGTGC GCCAGATCAA GGAGTTGCTT
GACACGCGCG TGCGCCCGGC CGTGGCGCAG GACGGGGGAG ACATCACCTT CCACGGCTTT
GACCGCGGCA TCGTCTATCT GCACATGCAG GGCGCCTGCG CGGGCTGCCC CTCTTCGACG
CTGACGCTGA AGATGGGGAT CGAGAACCTG CTCCGGCACT ATATCCCCGA AGTGCTCGAG
GTGCGCCCGG TTGCGGCCTG A
 
Protein sequence
MFIQTESTPN PATLKFLPGQ MVLEAGTADF ASAEAAATSP LARRIFGAGG VASVFFGTDF 
IAVTKEDEVV WDHVKPAILG AIMEHYQSGA PVLEGEQAAS GHATHDGPDE EIVRQIKELL
DTRVRPAVAQ DGGDITFHGF DRGIVYLHMQ GACAGCPSST LTLKMGIENL LRHYIPEVLE
VRPVAA