| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2267 |
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| Symbol | |
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| ID | 5083761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 2304862 |
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| End bp | 2306937 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640483831 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_001168462 |
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| Protein GI | 146278303 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.138313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.255699 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCC CGGTCCGCCC CGCGCCCCCC CTCAAGTTCG ACATCTCGTC CGGTCATCCG
AACCGGCTGG GCGCCGATTT CGACGGCGAG GGCACCAACT TCGCGCTCTT CTCGGAAAAC
GCCACGCGGG TGGAGCTGTG CCTCTTCGAC GAGACGGGCC GAAACCAGAC GCATTGCATG
GACCTGCCCG CCTACGAGGG CGGCATCTGG TACGGCTATC TTCCGGGCAT CCGCGAGGGG
CAGGCCTACG GCTACCGCGT CCACGGCCCC CACGCGCCCG AGGAAGGCCA CCGCTTCAAC
CCCAACAAGC TGCTGATCGA CCCCTACGCG CGCGAGTTGC GCGGCGACCT CGTCTGGGAC
GACGCGCTCT TCGGCTATCC GGTGGGCGGC GACGATCTGG AGCTCGATCC CCGCGACAGC
GCCCCCTTCA TGCCGAAGGC GGTGGTGGTC GATCCGGCCT TCGACTGGGA GGCGGACAAG
GCGCTGCGTC ACCGCTGGGA AGAGACGGTG ATCTACGAGG CCCATGTGAA GGGCCTGACC
ATGCGCCATC CAGGCGTGCC GGACGAGGAT CGCGGCACCT TCCGCGGCCT CGCCTCGCCC
GCCGTCATCG ACCATCTCAA GGCCATCGGC GTGACCGCGA TCGAGCTTCT GCCGGTGCAC
GGTTTCCTCA ACGACCGCCA CCTGATCGAG AAGGACCTGT CGAACTACTG GGGCTACAAC
ACGCTCTCGT TCTTCGCCCC CTACCGGCCC TACACCCGGT CCGGCTCGAT GCGCGAGGTG
AAGCAGGCGA TCAAGCGGTT CCACGACGCG GGCATCGAGG TGATCCTCGA TGTGGTCTAC
AACCACACCT GCGAGGGCAA CGAGAAGGGC CCGACGCTTT CGTTCCGCGG CATCGACAAC
GCCTCCTACT ACCTGCTCTC GCCCGAGGCG AAGCGCCATT CCTTCGACAC CACCGGCACC
GGCAACACGC TGAACGTGGC CCATCCGATG GTGCTGCGCA TGGTGATGGA CAGCCTGCGC
TACTGGGTCG AGGTCATGCA TGTGGACGGC TTCCGCTTCG ACCTTGCCTC GACGCTGGGG
CGCGAGCCGC AGGGCTTCGA GCGCGGCGGC TCGTTCTTCG CGTCGATCCG GCAGGACCCG
GTGCTTTCCA TGGTGAAGCT GATCGCCGAG CCCTGGGACA TCGGCGAGGG CGGCTACCAG
GTCGGCGGCT TCCCCTGGCC CTTCCGCGAG TGGAACGACA AGGCGCGCGA CGACCTGCGC
GCCTTCTGGC GCCGCGATCC GGGCCTGACG GGCGACGTAT CGCAGCGGCT GCTGGGCTCG
CCGGTGCAGT TCTCGCACTC GCACCGGCCG GCGACCTCGT CGATCAACTT CATCGCCGCG
CATGACGGCT TCACCGCCTG GGACCTCGTC TCCTACGACG AGAAGCACAA CGAGGCCAAC
GGCGAGGACA ATCGCGACGG GCACTCGCAC AATCTCTCGC ACAATCTGGG CGTCGAGGGG
CCGACGGACG ATCCGGGCAT CCTCGAGGCG CGCCTGCGGC GGGTGAAGGC GATGCTGGCC
ACGCTCTTCG TGTCGCAAGG TGTGCCGATG ATCCTCGCGG GCGACGAGTT CGGCCAGAGC
CAGCAGGGCA ACAACAACGC CTACTGTCAG GACAACGAGA TCGCCTGGCT CGACTGGCCG
AACGCGCGCG CGGATCTGAT CCGGGCCGTG TCCGACCTCG CGGCCTTCCG CCGTTCCGAG
GGCGGGCTGG CGCGCGCCCG CTTCGCGGCG GGGCCGGACG CGGTGCAGCA CGACACGCCG
GTGGCAAGCT GGCTGCACCC GGCCGGCCGC GACATGGAGG AGGGCGACTG GAACGACGGC
GATCTGCGGC TCTTTGGCCT GCGACTCGAC CTGCCGAAGG GGCGCGACCT TCTGATCCTG
CTCAATGCGG GCGATGATGG CGAATTCGCG CTGCCCGAGG GCGCGTGGCG GCTGCAGATC
GACACCGCGC GCGAGACGAT CGCCTGCGAC GAGCCCGCCG AAGGCACCCT GGCGGTTGGC
TGGCAGAGCG TGATGGTCCT GGCCGCCCCC GACTAG
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| Protein sequence | MKRPVRPAPP LKFDISSGHP NRLGADFDGE GTNFALFSEN ATRVELCLFD ETGRNQTHCM
DLPAYEGGIW YGYLPGIREG QAYGYRVHGP HAPEEGHRFN PNKLLIDPYA RELRGDLVWD
DALFGYPVGG DDLELDPRDS APFMPKAVVV DPAFDWEADK ALRHRWEETV IYEAHVKGLT
MRHPGVPDED RGTFRGLASP AVIDHLKAIG VTAIELLPVH GFLNDRHLIE KDLSNYWGYN
TLSFFAPYRP YTRSGSMREV KQAIKRFHDA GIEVILDVVY NHTCEGNEKG PTLSFRGIDN
ASYYLLSPEA KRHSFDTTGT GNTLNVAHPM VLRMVMDSLR YWVEVMHVDG FRFDLASTLG
REPQGFERGG SFFASIRQDP VLSMVKLIAE PWDIGEGGYQ VGGFPWPFRE WNDKARDDLR
AFWRRDPGLT GDVSQRLLGS PVQFSHSHRP ATSSINFIAA HDGFTAWDLV SYDEKHNEAN
GEDNRDGHSH NLSHNLGVEG PTDDPGILEA RLRRVKAMLA TLFVSQGVPM ILAGDEFGQS
QQGNNNAYCQ DNEIAWLDWP NARADLIRAV SDLAAFRRSE GGLARARFAA GPDAVQHDTP
VASWLHPAGR DMEEGDWNDG DLRLFGLRLD LPKGRDLLIL LNAGDDGEFA LPEGAWRLQI
DTARETIACD EPAEGTLAVG WQSVMVLAAP D
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