Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2257 |
Symbol | |
ID | 5083751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 2293000 |
End bp | 2294106 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640483821 |
Product | secretion protein HlyD family protein |
Protein accession | YP_001168452 |
Protein GI | 146278293 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.202721 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.250908 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCC AGACCTCTTC CGACTCTCTC CGCGCAACCC CGGTGGTGAC CGAGCCGAAG CCCCGCCGGG GGCGCCGCAT CCTGCTGATG GCGGCCCTGC CGGCCGCGCT CCTTGGTGGC GCCGGCGCCT GGTGGATCAC CGGCGGCCGC TACGAGACGA CCGACAACGC CTATCTGCAT CAGGCGGTGG TGGCGATCGC GTCCGAAGTC TCGGGCCGCG TGACGGAGGT GTCGGTTGCC GACAACCGGC CCGTGCAGAA GGGCGACATC CTGTTCGTGA TCGACCCCGA GCCGCGCCGC CTCGCGCTGG CCAAGGCCGA GGCCGCCGTC GCCGCGGCCC GGCTGCAGGT CGAGCAGCTG AAGGTGGCCC ATGCGCAGGC CGTGGCGCAG GAGAATCTGG CCGCCGACGA TGCGGCCTAC CTTGCCAACG AACTTGTGCG CCAGCAGGCG CTTTCGACGA AGGGCGTGTC CGCGACGACC GCGCTCGACG ACGCCCGCCA CGAGGCGCAG CGCGCGGCCG AACTGCTCGT TGTCGCGCGG CAGGCCACGG CGAGCGCGCT GGCGGCCCTG GGTGGCGTGG CCGACGGCCC GGTGGACGAT CACCCGGCGG TGCGCTCGGC GCTGGCGGCC CGCGACGAGG CCGCCTACCA GCTCTCGCTG ACCGAGGTGC GCGCGCCCGC CGATGGTGTG ATCTACCGCG CGGCGTCGTT CAAGCCGGGG CAGATGGTGA CGGCGGGCCA GTCGCTCTTC GCGCTGGTCG AGACGCAGGA TGTCTGGATC GACGCCAACT TCAAGGAGAC GCAGCTGGCA GGCATCGCGC CCGGCCAGAA GGCCGAGGTG ACCTTCGACC TGCGCCCCGA CCGGCCCTAC GAGGCGACGG TCGAATCCGT GGGCGCGGGC ACCGGCTCGG AGTTCTCGCT GCTGCCGGCG CAGAACGCGA CCGGCAACTG GGTCAAGGTG ACCCAGCGGG TTCCCGTTCG CCTGCGGTTC GAGGAGGGGG CCGAGCTGGC GGGCCTCGCC TCGGGCCTCT CGGCCGAGGT GTCGGTCGAT ACCGGCCGCG TGCGCCACAT ACCGGGGCTC TCAAGCTTCG CCGCCACCGC CGACTGA
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Protein sequence | MNAQTSSDSL RATPVVTEPK PRRGRRILLM AALPAALLGG AGAWWITGGR YETTDNAYLH QAVVAIASEV SGRVTEVSVA DNRPVQKGDI LFVIDPEPRR LALAKAEAAV AAARLQVEQL KVAHAQAVAQ ENLAADDAAY LANELVRQQA LSTKGVSATT ALDDARHEAQ RAAELLVVAR QATASALAAL GGVADGPVDD HPAVRSALAA RDEAAYQLSL TEVRAPADGV IYRAASFKPG QMVTAGQSLF ALVETQDVWI DANFKETQLA GIAPGQKAEV TFDLRPDRPY EATVESVGAG TGSEFSLLPA QNATGNWVKV TQRVPVRLRF EEGAELAGLA SGLSAEVSVD TGRVRHIPGL SSFAATAD
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