| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2231 |
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| Symbol | |
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| ID | 5084135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 2264989 |
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| End bp | 2266389 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 640483795 |
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| Product | RNA-binding S4 domain-containing protein |
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| Protein accession | YP_001168426 |
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| Protein GI | 146278267 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00234161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA GCACAGACGG CGAGCGCATC GCCAAGGTTC TCTCCCGCGC CGGCGTCGCC
TCGCGACGCG ACGCCGAGCG GATGATCGAA CTCGGCCGCG TCGCCGTGAA CGGCCGCACC
ATCGACAGTC CCGCGCTCAA CGTGGGTCCG AAGGACCGGA TCACCGTCGA TGGCCAGCCC
CTTGCCCCGC CCCAGCCCGC GCGGCTCTGG CTCTATTACA AGCCCGAGGG GCTCGTCACG
TCGGCCGCCG ACGAGAAGGG CCGCGAGACG GTCTTCGACC ATCTGCCCGA GGACCTGCCC
CGCGTCATGT CGGTCGGCCG GCTGGACCTC AACTCCGAGG GGCTGCTGCT CCTGACCAAC
GACGGCGAAC TCAAGCGCCG GCTCGAGCTT CCCTCGACCG GCTGGCTGCG CAAGTATCGC
GTCCGGGTGA AGGGCAACCC CACGGATCCC GATCTCGAGC CGCTGCGCAA GGGCATCACC
GTCGAGGGAG AGAGGTTCCA GCCGATGACG GTCACGCTCG ACCGGGTGCA GGGCGCCAAC
GCCTGGCTCA CCGTCGGGCT GCGCGAGGGC AAGAACCGCG AGATCCGGCG CGCCATGTCG
GCCATCGGCC TGACGGTCAA CCGGCTGATC CGCATCAGCT ACGGCCCCTT CCGGCTGAAC
GAGCTGCAGC CGGGCATGGT CGAGGAGGTC CGCCCCAAGG TCCTGCGCGA CCAGCTCGGC
CTCGATCCGC GCGAAGAGGA TGGGCGTCCG CCCAAGGCTG CGCGGCCTCC GCGCGGGGCC
GGCGCGGCCT CCGGCCGCTC CCATCCGGGT GCCCGGCCAT CGGGATCGAA ACCCCTTCCG
CCCGATGAAG CGCGCGGCGG GTCCAAAGGC GCCCCGCGCG GCCGCGGTGC CGGGGCGGCT
CCGAAATCGG CCGGACCGGC CCGTCGTCGC GACGCTCTCC CGGATGCCGC CATCGACGCC
CGGCCGTCCG GGCCCCGGGC ACGCCCCGCC GCCGGTGCCG CAAAGGCACC GTCCGGGCGC
GCCTTCGGCG GGGCCAGGCC GACATCCTCG CGCCCGACCG GCACTCCGGC CGGTACTCCG
GCCGCGACAG GACCGGCCAA GGCGGGCGGC CGCCGGCCGC CTGGCCCCGC GCCCCGCGGA
ACGGGTCCCG GGACGGGCCC GGCTTCGGGA GGGCCTCGGC AGGGCCCGAA GTCGGCTCCG
GCCAAGGCGC CTCGCCGGAC AGGGCCGGAC GAGGGGCGCG GCGGCCCGGC CGGCGCAGGC
AGCGCCCGCA CCGGCAAGCC TGCGGCCTCC GCCCCCCGCA AGCCGCCGTC CGAGGGGCGC
CCGCGCGGCC CGTCGCGCGG ACCGGGCGGC AGCGGCGGCC CTCCGCCCCG CGGGCCGAAG
GGGCGGCCGG GCAAGGGCTG A
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| Protein sequence | MTDSTDGERI AKVLSRAGVA SRRDAERMIE LGRVAVNGRT IDSPALNVGP KDRITVDGQP
LAPPQPARLW LYYKPEGLVT SAADEKGRET VFDHLPEDLP RVMSVGRLDL NSEGLLLLTN
DGELKRRLEL PSTGWLRKYR VRVKGNPTDP DLEPLRKGIT VEGERFQPMT VTLDRVQGAN
AWLTVGLREG KNREIRRAMS AIGLTVNRLI RISYGPFRLN ELQPGMVEEV RPKVLRDQLG
LDPREEDGRP PKAARPPRGA GAASGRSHPG ARPSGSKPLP PDEARGGSKG APRGRGAGAA
PKSAGPARRR DALPDAAIDA RPSGPRARPA AGAAKAPSGR AFGGARPTSS RPTGTPAGTP
AATGPAKAGG RRPPGPAPRG TGPGTGPASG GPRQGPKSAP AKAPRRTGPD EGRGGPAGAG
SARTGKPAAS APRKPPSEGR PRGPSRGPGG SGGPPPRGPK GRPGKG
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