| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2229 |
|---|
| Symbol | |
|---|
| ID | 5084133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 2263627 |
|---|
| End bp | 2264319 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640483793 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001168424 |
|---|
| Protein GI | 146278265 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0154515 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCA CCTGGCTTGG CCATTCCGGC TTCCGCATCG AGATCGAAGA GGCCGTGCTG
CTCGTCGATC CCTGGCTCAG CGGCAACCCG ATGTTCCCCA TCGAGCGGCG CGACGAGGCG
ATCGCAGGCG CCACCCACAT CCTGCTCACC CACGGTCACG GAGACCATTC CGGCGACGCC
GTCGCCATCG CCTCCGAGCT CGGCCTGCCG ATCGTGGGCA TCTACGACCT CGTCACCTGG
CTCCAGTCGC GGGACGGCGT GGACGGCATC GGCTTCAACA AGGGCGGCAC GGTCACGCTC
GACGGCGCCC GCGTCACGAT GGTCCATGCC ACCCACTCCT CCTCGATCAT GGGCGAGGCG
GGCCCGGTCT ATACCGGCAC CGAATCGGGC TACATGATCG CGGGCGAGGG CCATGTGATC
TATGCCTCGG GCGACACGGA CATCATGGCC GACATGGGCT GGATGGGCGA GTACCACCGC
CCCGACATCG GCATCCTCGC AGCCGGCGGC CATTTCACCA TGGACATGAA GCGCGCGGCC
TTCGCCGCCC GCAAATATTT CGACTTCCGG ACGGTCATCC CCTGCCACTA CCGCACCTTC
CCGCTCCTCG AGCAATCCGC CGAGGCCCTG CGCCAGGGCC TGCCGGGGGT CGAGGTCCTC
GAGCCCGAGG TGCTCGAGCC GATCACGATC TGA
|
|---|
| Protein sequence | MKITWLGHSG FRIEIEEAVL LVDPWLSGNP MFPIERRDEA IAGATHILLT HGHGDHSGDA
VAIASELGLP IVGIYDLVTW LQSRDGVDGI GFNKGGTVTL DGARVTMVHA THSSSIMGEA
GPVYTGTESG YMIAGEGHVI YASGDTDIMA DMGWMGEYHR PDIGILAAGG HFTMDMKRAA
FAARKYFDFR TVIPCHYRTF PLLEQSAEAL RQGLPGVEVL EPEVLEPITI
|
|---|
| |