Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2222 |
Symbol | |
ID | 5084126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 2256986 |
End bp | 2257816 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640483785 |
Product | ABC transporter related |
Protein accession | YP_001168417 |
Protein GI | 146278258 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.801254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGACG AACGCCCCCC CGCCGCGACC GAGACGCTGC TCGAGGTCAA CAATATCGAG GTCATCTACA ACCACGTCAT CCTCGTGCTG AAGGGGGTGA GCCTGCATGT GCCGAAGGGC GGCATCACGG CGCTTCTGGG CGGCAACGGC GCGGGCAAGA CCACCACGCT GAAGGCGATC TCGAACCTGC TGCAGTCCGA GCGCGGCGAG GTCACCAAGG GCTCAATCCT CTACCGCGGC GAGCGGGTGC AGGATCTGGA CCCGGCGACG CTGGTCCGGC GCGGCGTCAT CCAGGTGATG GAAGGACGCC ACTGCTTCGA GCATCTGACC GTCGAGGAGA ACCTGCTGAC CGGCGCCTAC ACCCGCACGG ACGGGCGGGC GGCGATCATG GACGATCTCG AGATGGTCTA CACCTACTTC CCGCGCCTGC GCGAGCGGCG GAAAAGCCAG GCCGGCTACA CCTCGGGCGG CGAGCAGCAG ATGGTGGCGA TGGGCCGCGC CCTGATGAGC CGGCCCGAGA TGATCCTGCT CGACGAGCCC TCGATGGGCC TCGCCCCGCA GCTCGTCGAA CAGATATTCG AAATCGTCCG GGCGGTGAAC GAGGGCGAGG GCGTCACCTT CCTTCTGGCC GAGCAGAACA CCAACGTGGC ACTGCGCTAC GCCCACACCG GCTACATCCT CGAGAGCGGT CGCGTGGTCA TGGAGGGCTC GGCGCAGGAG CTGCGCGAGA ACCCCGACGT GAAGGAATTC TACCTCGGCA TGTCCGACAA GGGCCGCAAG TCCTTCCGTG ACGTGCGCTC CTACCGGCGG CGCAAGCGGT GGCTGGCATG A
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Protein sequence | MFDERPPAAT ETLLEVNNIE VIYNHVILVL KGVSLHVPKG GITALLGGNG AGKTTTLKAI SNLLQSERGE VTKGSILYRG ERVQDLDPAT LVRRGVIQVM EGRHCFEHLT VEENLLTGAY TRTDGRAAIM DDLEMVYTYF PRLRERRKSQ AGYTSGGEQQ MVAMGRALMS RPEMILLDEP SMGLAPQLVE QIFEIVRAVN EGEGVTFLLA EQNTNVALRY AHTGYILESG RVVMEGSAQE LRENPDVKEF YLGMSDKGRK SFRDVRSYRR RKRWLA
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