Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2180 |
Symbol | |
ID | 5084195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 2210192 |
End bp | 2211247 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640483743 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001168375 |
Protein GI | 146278216 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.865242 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTGA AGGTCCTTTT CACAGGCGCG GACGGCTACG TCGGCGCCCT TCTTGGCCCC TATCTGCTGG AAAGAGGCAT TGAGGCCGTG GGGCTCGATA CGGGTTTCTA CCGCAAGGGC TGGCTCTACC CGACATCGGC GCCGCGCCCG GCCGTCATCA CCAAGGACAT CCGGCAGGTC ACGGCCGAGG ATCTGGAAGG ATTCGATGCG GTGGCCCATC TGGCCGAACT GTCGAACGAT CCGCTGGGCC AGCAATCGCC CGGCCTCACG CATGAGATCA ACCACGGCGG CTCGATGCAT CTGGCCGAGA TGGCCCGCAA GGCGGGCGCG AAGCGGTTCG TCTACATGTC CTCCTGCTCG GTCTATGGGG TGGGGCGGCC CGACGAGATC CTCGACGAGA CGAGCCCCGT CAATCCGCAG ACCGCCTATG CCGAATGCAA GGTGAAGGTC GAACAGGATC TGACGGGCCG GGCCGGCGCG GATTTCGAGC CCTGCTTCCT GCGCAACGCG ACCGCCTATG GGGCCAGCCC GCGCCAGCGT TTCGACATCG TGCTCAACGA CCTCTGCGGC CTGGCCTGGA CCACGAAGAA GATCACGCTC CAGTCCGACG GCTCGCCCTG GCGGCCGCTC GTTCACGCGC TGGACATGTG CCAGGCGGTC TGGCGCTCGC TGATCGCGCC CGCCGATGCG ATCACGGGCC AGTGCTACAA CGTGGGTTCC AACGACCAGA ACTACCGCGT GATCGACATC GCCCGCATCG TGGCCGACAG CTTTCCGGGC TGCGAGCTTG AGGTGGGCCA GCCTTCGGCC GACAACCGCT CCTACCGGGT GAACTTCGAC AAGATCCAGC GCGTGCTGCC CGACTTCCGG TGCGAATGGA CCGCCGAGAA GGGCGCACGC CAGATGCGCC AGGTGTTCGA GCGCATCGAC ATGACCCCCG AGGAGTTCCG CGCCGAGCCC TACACCCGGC TCAAGATGCT GATGCGGCTG CGCGCCGCCC GGCTTCTCGA CGACAAGCTC TACTGGGCCA ATCCGGCTCT GGAGGCGGTG GCATGA
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Protein sequence | MPLKVLFTGA DGYVGALLGP YLLERGIEAV GLDTGFYRKG WLYPTSAPRP AVITKDIRQV TAEDLEGFDA VAHLAELSND PLGQQSPGLT HEINHGGSMH LAEMARKAGA KRFVYMSSCS VYGVGRPDEI LDETSPVNPQ TAYAECKVKV EQDLTGRAGA DFEPCFLRNA TAYGASPRQR FDIVLNDLCG LAWTTKKITL QSDGSPWRPL VHALDMCQAV WRSLIAPADA ITGQCYNVGS NDQNYRVIDI ARIVADSFPG CELEVGQPSA DNRSYRVNFD KIQRVLPDFR CEWTAEKGAR QMRQVFERID MTPEEFRAEP YTRLKMLMRL RAARLLDDKL YWANPALEAV A
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