Gene Rsph17025_2180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2180 
Symbol 
ID5084195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2210192 
End bp2211247 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content66% 
IMG OID640483743 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001168375 
Protein GI146278216 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.865242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTGA AGGTCCTTTT CACAGGCGCG GACGGCTACG TCGGCGCCCT TCTTGGCCCC 
TATCTGCTGG AAAGAGGCAT TGAGGCCGTG GGGCTCGATA CGGGTTTCTA CCGCAAGGGC
TGGCTCTACC CGACATCGGC GCCGCGCCCG GCCGTCATCA CCAAGGACAT CCGGCAGGTC
ACGGCCGAGG ATCTGGAAGG ATTCGATGCG GTGGCCCATC TGGCCGAACT GTCGAACGAT
CCGCTGGGCC AGCAATCGCC CGGCCTCACG CATGAGATCA ACCACGGCGG CTCGATGCAT
CTGGCCGAGA TGGCCCGCAA GGCGGGCGCG AAGCGGTTCG TCTACATGTC CTCCTGCTCG
GTCTATGGGG TGGGGCGGCC CGACGAGATC CTCGACGAGA CGAGCCCCGT CAATCCGCAG
ACCGCCTATG CCGAATGCAA GGTGAAGGTC GAACAGGATC TGACGGGCCG GGCCGGCGCG
GATTTCGAGC CCTGCTTCCT GCGCAACGCG ACCGCCTATG GGGCCAGCCC GCGCCAGCGT
TTCGACATCG TGCTCAACGA CCTCTGCGGC CTGGCCTGGA CCACGAAGAA GATCACGCTC
CAGTCCGACG GCTCGCCCTG GCGGCCGCTC GTTCACGCGC TGGACATGTG CCAGGCGGTC
TGGCGCTCGC TGATCGCGCC CGCCGATGCG ATCACGGGCC AGTGCTACAA CGTGGGTTCC
AACGACCAGA ACTACCGCGT GATCGACATC GCCCGCATCG TGGCCGACAG CTTTCCGGGC
TGCGAGCTTG AGGTGGGCCA GCCTTCGGCC GACAACCGCT CCTACCGGGT GAACTTCGAC
AAGATCCAGC GCGTGCTGCC CGACTTCCGG TGCGAATGGA CCGCCGAGAA GGGCGCACGC
CAGATGCGCC AGGTGTTCGA GCGCATCGAC ATGACCCCCG AGGAGTTCCG CGCCGAGCCC
TACACCCGGC TCAAGATGCT GATGCGGCTG CGCGCCGCCC GGCTTCTCGA CGACAAGCTC
TACTGGGCCA ATCCGGCTCT GGAGGCGGTG GCATGA
 
Protein sequence
MPLKVLFTGA DGYVGALLGP YLLERGIEAV GLDTGFYRKG WLYPTSAPRP AVITKDIRQV 
TAEDLEGFDA VAHLAELSND PLGQQSPGLT HEINHGGSMH LAEMARKAGA KRFVYMSSCS
VYGVGRPDEI LDETSPVNPQ TAYAECKVKV EQDLTGRAGA DFEPCFLRNA TAYGASPRQR
FDIVLNDLCG LAWTTKKITL QSDGSPWRPL VHALDMCQAV WRSLIAPADA ITGQCYNVGS
NDQNYRVIDI ARIVADSFPG CELEVGQPSA DNRSYRVNFD KIQRVLPDFR CEWTAEKGAR
QMRQVFERID MTPEEFRAEP YTRLKMLMRL RAARLLDDKL YWANPALEAV A