Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2179 |
Symbol | |
ID | 5084194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 2208846 |
End bp | 2210195 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640483742 |
Product | SAF domain-containing protein |
Protein accession | YP_001168374 |
Protein GI | 146278215 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4091] Predicted homoserine dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATCG TCGACAAGGC GCTGGCCCGG CGCGCGGCCG AGGGCCGGCC GATCCGCGTC GGCATGATCG GCGCGGGCTT CATGGGGTCG GGCATTGCGT TGCAGATCGC GAACTCGGTG CCCGGGATGC AGCTCGTGGC GATCGCGGCG CGGCGGGTCG AGCAGGCGAC CGTGGCCTTC GAGTCCAGTC GGACGGGCGA GAGCGTGCGC CGTGTCTCCA CACAGGCCGA ACTCGAGGCC GCGATCGTGG CCGGCGAGCC TGCCGTCACC GACGATCCCG CCCTCGTGGG CTGCGCCCGC GGGATCGAGG CCATCATCGA GGTGACGGGC TCGATGGACT ATGCGCTGCT CGCGGTCGAG GCGGCCATCG CCACCGGCAA GCATGTGATC CTGATGAACG CCGAGCTGGA CGGGACCATC GGGCCGCTCC TGAAGAAGCG GGCCGATGCC GCGGGCGTGG TGATCACCAA CTGCGACGGC GACCAGCCGG GCGTGCAGAT GAACCTGATC CGGTTCGTGA AGGGGATTGG CGTCAAGCCG GTCCTGTCGG GCAACATCAA GGCCCTGCAG GATGAGTATC GCACCCCCGA GACCCAGCGC GGCTTTGCCG AGAAATGGGG TCAGAACGTC CATATGGTGA CCTCCTTCGC GGACGGCACC AAGATCTCCT ATGAGCAGGC GATCGTGGCC AATGGAACGG GGATGCGCGT CGCGCGGCGC GGAATGATCG GGATCGACCC CACGGGCAAG AACCCGACGC TGCCGCTGCG CCCGCTTGAG GAATATGTTG CGATGTTCGC GCCGCACCTT GATCCCGAGG GGCCCGGCAT CGTCGATTAT GTCGTGGGTG CGCGGCCGGG GCCGGGGGTC TTCGTGATCG GCACCCACGA CGACCCACGG CAAAAGCATT ACCTCAATCT CTACAAGCTC GGCGAGGGGC CCTACTACCT CTTCTATACG CCCTACCACC TCTGCCATTT CGAAGTGCCG ATGACGGTGG CGCGCGCGGT GCTGTTCGGG GATGCGGCGC TGACGCCGCT CGGCGCGCCG CAGGTGGGCG TCGTGGCGGT GGCCAAGCGC GATCTGAAGG CGGGCGAAGT GCTCGACGGG ATCGGCGGCT TCACCGCCTA TGGCCAGTGC GAGAACATCG AGGCGGTGGC CGCCGAGCGG TTGCTGCCGA TGGGTCTGGC CGAAGGGGGT GTGCTGCTGC GCGACATCCC GCGCGACCAG ACGCTGACCT TCGCGGATGT GCGCCTGCCC GAGGGCCGGC GCATCGACGC GCTTTACGCG GAGATGGAGC AGGAGTTCGG CCTCGCGCAA CCCGCCGAGA CCTTTGCCCT GATCGGCTGA
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Protein sequence | MIIVDKALAR RAAEGRPIRV GMIGAGFMGS GIALQIANSV PGMQLVAIAA RRVEQATVAF ESSRTGESVR RVSTQAELEA AIVAGEPAVT DDPALVGCAR GIEAIIEVTG SMDYALLAVE AAIATGKHVI LMNAELDGTI GPLLKKRADA AGVVITNCDG DQPGVQMNLI RFVKGIGVKP VLSGNIKALQ DEYRTPETQR GFAEKWGQNV HMVTSFADGT KISYEQAIVA NGTGMRVARR GMIGIDPTGK NPTLPLRPLE EYVAMFAPHL DPEGPGIVDY VVGARPGPGV FVIGTHDDPR QKHYLNLYKL GEGPYYLFYT PYHLCHFEVP MTVARAVLFG DAALTPLGAP QVGVVAVAKR DLKAGEVLDG IGGFTAYGQC ENIEAVAAER LLPMGLAEGG VLLRDIPRDQ TLTFADVRLP EGRRIDALYA EMEQEFGLAQ PAETFALIG
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