| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2171 |
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| Symbol | |
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| ID | 5084186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 2202147 |
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| End bp | 2202953 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640483734 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001168366 |
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| Protein GI | 146278207 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0038105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGGGG GCGGGTTTCG GATCTACGCG CTGGCCTACC TGATCTTCCT CTATGCGCCG
ATCATCCTGC TGCCGCTCTT TGCCTTCAAC GAGGGCACGG TCATTGCCTT TCCGCTGACC
GGCTTCAGCA CCAAGTGGTT CGTGGCCGCG GCCAACCAGC CGACTCTGTG GCTGGCGGTG
AAGAACAGCC TGATCATCGC GGCCTCGGCC TCGGTCATCT CGACCGCGCT CGGCGTCTTT
GCGGCCCGCG CCTCGACGCG TTACCACTTT CCCGGCAAGG GGGGCGTGAT GGGGCTCATC
ATGCTGCCGC TGGTGCTGCC CGAGATCATC GTGGCGGTCT CGCTGCTGGT GGTGCTGCTC
GGGCTGGGGA TCAACCTGTC GATCGTCACC GTCATCCTCG GGCATGTGCT GATCTGCACG
CCCTTCACCA TCGCGATCCT GACCTCGGCC TTCCAGTCGC TCGACCGCTC GCTCGAGGAG
GCCGCCTATG ACCTGGGCGA GACCGGGATC TCGACCTTCC GGCTGATCAT CCTGCCGCTG
GTCATGCCGG GGATCATCTC GTCGCTGCTG ATCAGCTTCA CCATCAGCCT CGACGAGTTC
ATCATCGCCT TCTTCCTCGC GGGCACCCAG CCCACGCTGC CGATCTACAT CTTCTCACAG
TTCCGCTTCC CGCAGGCGGT GCCCGTCATC ATGGCGCTCG GAACGGTGCT CGTCGCCTGC
TCGATCGTGC TGCTCGCCAG TGCCGAATAT TTCCGCCGCC GTGGCCTTGC CCGTTCCGGC
GCCAAGGATA CCGGAGGCTT CCTGTGA
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| Protein sequence | MKGGGFRIYA LAYLIFLYAP IILLPLFAFN EGTVIAFPLT GFSTKWFVAA ANQPTLWLAV
KNSLIIAASA SVISTALGVF AARASTRYHF PGKGGVMGLI MLPLVLPEII VAVSLLVVLL
GLGINLSIVT VILGHVLICT PFTIAILTSA FQSLDRSLEE AAYDLGETGI STFRLIILPL
VMPGIISSLL ISFTISLDEF IIAFFLAGTQ PTLPIYIFSQ FRFPQAVPVI MALGTVLVAC
SIVLLASAEY FRRRGLARSG AKDTGGFL
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