| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2170 |
|---|
| Symbol | |
|---|
| ID | 5084185 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 2201053 |
|---|
| End bp | 2202150 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640483733 |
|---|
| Product | spermidine/putrescine ABC transporter ATPase subunit |
|---|
| Protein accession | YP_001168365 |
|---|
| Protein GI | 146278206 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.051022 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCTG CCGCGAAACC CACGATGATC GAGTTCCGCG ACGTCCACAA ATACTACGGC
GACTACCACG CGCTGCGCGG CATCACGGCG ACGATCCGGG CGGGCGAGTT CTTCTCGCTG
CTGGGCCCCT CGGGCTGCGG CAAGACCACG CTGCTCAGGA CCATCGCGGG GTTCGAGGAA
ATCTCGTCGG GTGCCGTGAT GATCGACGGC AAGCACATGG AGGGCGTGCC CGCGAACAAG
CGGCCCACCA ACATGGTGTT CCAGAGCTAT GCGATCTTTC CGCACCTCAC GGTGGCCGAG
AACGTGGGCT TCGGCCTACG CCGCGCCAGG CTGGCGAAGG AGGAACTGAA TCGCCGCGTA
GGCGAGGCGC TGGAGATGGT GGGGCTGCGC GGCTACGGCG CGCGGGCGGC CCATGCGCTT
TCGGGCGGCC AGCGGCAGCG GGTGGCGCTG GCCCGCGCGC TGATCCTGAA GCCCAAGGTG
CTGCTGCTGG ACGAGCCGCT CTCGGCGCTC GACAAGAAGA TGCGCGAGCA GATGCAGGTG
GAGCTGATCA AGCTGCAGCG GCAGGTGGGC ATCACCTTCA TTCTCGTGAC CCACGACCAG
GAGGAGGCGC TGGTCATGTC CGACCGGATC GCCGTGATGT TCGAGGGCGA GATCGCCCAG
CTCGCCGATC CCGAGACGCT CTACCGTCGG CCCAACTCGC GCAAGGTGGC GGATTTCATC
GGCACGATGA ACTTCCTGCC GGCGCGGATC CTGTCCGAGG GCGAGCAGGG GATCGAGGTC
GAGGCGCAGG GGCTGGGGCG GATGCTGCTC GACCCGAGCC AGGCGCCCGG TGCGGCCTTG
GGCACGGGCA GCTCGGTCGG CTTTCGCCCC GAGACCGCCA CCATGCTGTT CGAGGGCCAG
AAGGCGGAGC GGGAGGCGAT GGGGACCGTC GAGGAGGTCG TCTATTACGG CGACATGACC
TATTACGACG TGCGCCTTGA CGGAACCGAG GCGCCGATCC GCATCTCGAT GCGCAATGTC
TTCGGCCGGC CGGTGCTCGA GATCGGGGCC CGCACGCGCG TCGCCTGGAG CCCGGGGGCG
ATCGTCCTGT TCCGCTGA
|
|---|
| Protein sequence | MTAAAKPTMI EFRDVHKYYG DYHALRGITA TIRAGEFFSL LGPSGCGKTT LLRTIAGFEE
ISSGAVMIDG KHMEGVPANK RPTNMVFQSY AIFPHLTVAE NVGFGLRRAR LAKEELNRRV
GEALEMVGLR GYGARAAHAL SGGQRQRVAL ARALILKPKV LLLDEPLSAL DKKMREQMQV
ELIKLQRQVG ITFILVTHDQ EEALVMSDRI AVMFEGEIAQ LADPETLYRR PNSRKVADFI
GTMNFLPARI LSEGEQGIEV EAQGLGRMLL DPSQAPGAAL GTGSSVGFRP ETATMLFEGQ
KAEREAMGTV EEVVYYGDMT YYDVRLDGTE APIRISMRNV FGRPVLEIGA RTRVAWSPGA
IVLFR
|
|---|
| |