Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2169 |
Symbol | |
ID | 5084184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 2200316 |
End bp | 2200933 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640483732 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001168364 |
Protein GI | 146278205 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0813077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGC GCGGCTACCA TCACGGCAAC CTCCGCCAGG CCCTGGTTGA GGCGGCGCTC CGGCTCATCA CCGAAAAGGG GCCTCAGGGC TTCACCCTGT CCGAGGCGGC CAAGGCGGCC GATGTCACGC CGGCTGCGGT CTATCGCCAT TTCGCTGGAC GCGACGAGCT GATCGCCGAA GCGGCCCGGC AGGGCTACGA GATCTTCGGC GCGCTGATGG AGTACGCCTA CGATGAGGGC CGCCCTTCGG CGCTCGCGGC CTTCGAGGCG ACGGGGCGGG CCTATCTCGC CTTCGCGCGC AAATATCCCG GCCACTACAT GGCCATGTTC GAAAGCGGGA TCTCCCTCCA GTCCAACGCC GAGCTTGCGG CGGCGGCCCA GAGGGCGCGG GACGTGCTCG AGCGGGCGGC GACGCGCCTG TCCGAACATA TCCCACCCGA AAAGCGCCCG CCGCCGGCGA TGTTCTCGGC CCATGTCTGG GCCCTCAGCC ACGGGGTCGT CGAACTCTTC ACCCGCGGCG CCCCCGGCGC CAAATCCCCG TTTCCGCCCG AGGATCTGCT CGAGGCCGGG ATCGGCATCT ATCTGCGCGG CCTGGGCCTC CTGCCCCCCG ATCGCTGA
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Protein sequence | MSKRGYHHGN LRQALVEAAL RLITEKGPQG FTLSEAAKAA DVTPAAVYRH FAGRDELIAE AARQGYEIFG ALMEYAYDEG RPSALAAFEA TGRAYLAFAR KYPGHYMAMF ESGISLQSNA ELAAAAQRAR DVLERAATRL SEHIPPEKRP PPAMFSAHVW ALSHGVVELF TRGAPGAKSP FPPEDLLEAG IGIYLRGLGL LPPDR
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