Gene Rsph17025_2166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2166 
Symbol 
ID5084181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2197533 
End bp2198450 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content63% 
IMG OID640483729 
Producthomoserine O-succinyltransferase 
Protein accessionYP_001168361 
Protein GI146278202 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1897] Homoserine trans-succinylase 
TIGRFAM ID[TIGR01001] homoserine O-succinyltransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATCA CCCTGCCCGC CACCCTGCCC GCCTTCGACG TGCTGACCCA CGAGGGCGTC 
ATGGTGATGA CACCGGAGCG GGCGGCGCGG CAGGACATCC GTCCGCTGCG GATCGGGCTT
CTCAACCTGA TGCCCAAGAA GATCCAGACC GAGAACCAGT TCGCCCGGCT GATCGGCGCC
ACGCCGCTGC AGATCGACTT CCAGCTGATC CGCATGACCG AGCATCAGAC GAAGAACACC
GCCGCCGAGC ACATGGCCGC CTTCTACCGC CCCTTCCAGG AGGTGAAGCA CGAGAAGTTC
GACGGGCTGA TCATCACCGG CGCCCCGATC GAGCATCTCG ATTTCTCGGA GGTCACCTAC
TGGGACGAGC TTTGCGAGGT CATGGACTGG ACCCAGACCC ACGTCCATTC GACCTTCGGC
GTCTGCTGGG GCGGCATGGC GATGATCTAT CATTTCCACG GCGTGCCCAA GCACATGCTG
GCCGCCAAGG CCTTCGGCTG CTTCCGCCAC CGCAACGTGG CGCCCGTCTC GCCCTATCTG
CGCGGCTTCT CGGACGATTT CGTGATCCCC GTCAGCCGCT GGACCGAGAT GCGGCAGGAC
GAGATCGACG CGGCGCCGGG CCTGCGCACG CTGCTCGCCT CGGACGAGGT GGGCCCCTGC
CTCGTCGAGG ATGCGGGCCA CCGCGCGCTC TACATCTTCA ACCATTTCGA ATATGACAGC
GACACGCTGA AGCAGGAGTA TGACCGCGAC ATCGGCAACG GAAAGCCGAT CAACGTGCCG
CGCAACTACT ATCCGGACGA CGATCCGACA AAACCGCCGC TGAACAGGTG GAGAAGCCAC
GCCCACCTCC TATATGGAAA CTGGATCAAC GAGATCTATC AGTCCACCCC GTATGACATT
CAACAGATTG GCCGTTAG
 
Protein sequence
MPITLPATLP AFDVLTHEGV MVMTPERAAR QDIRPLRIGL LNLMPKKIQT ENQFARLIGA 
TPLQIDFQLI RMTEHQTKNT AAEHMAAFYR PFQEVKHEKF DGLIITGAPI EHLDFSEVTY
WDELCEVMDW TQTHVHSTFG VCWGGMAMIY HFHGVPKHML AAKAFGCFRH RNVAPVSPYL
RGFSDDFVIP VSRWTEMRQD EIDAAPGLRT LLASDEVGPC LVEDAGHRAL YIFNHFEYDS
DTLKQEYDRD IGNGKPINVP RNYYPDDDPT KPPLNRWRSH AHLLYGNWIN EIYQSTPYDI
QQIGR