Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2149 |
Symbol | |
ID | 5082927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 2178554 |
End bp | 2179738 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640483712 |
Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
Protein accession | YP_001168344 |
Protein GI | 146278185 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAGCC TGTCGATCTT CGGGGCCACC GGCTCCATCG GCGAATCCAC CTTCGATCTC GTCATGCGGA AAGGGGGCCC GGAGGCCTTC CGAACCGTGG CCCTGACCGG GGGCCGCAAC GTGGCGCGAC TGGCCGAGAT GGCGCGCGCG CTGAAGGCGG AGCTGGCCGT CACCGCGCAT GAAGAGTGCC TGCCCGCGCT GCGCGAGGCG CTGGCGGGAT CGGGGACCGA GGTCGCGGGC GGAACGCAGG CCATCGCCGA GGCGGCCGAC CGGCCGGCCG ACTGGACGAT GTCGGCGATC GTGGGGGCCG CGGGCCTCGT GCCGGGGATG CGGGCGCTGA AGCACGGCCG GACGCTGGCC TTGGCGAACA AGGAAAGCCT TGTCACCGCG GGCCAGCTTC TGATGCGCAC CGCCGAGGAG AACGGCGCCA CCATCCTGCC GGTGGACAGC GAACATTCGG CCGTCTTCCA GGCGCTCGCG GGTGAGGACA CGACCTGCGT CGAGCGGGTG ATCATCACCG CGTCGGGCGG GCCGTTCCGC GACTGGACGC TCGAGCAGAT CCGGGGCTGC ACCGTGGCGC AGGCGATGGC GCATCCGAAC TGGTCGATGG GCCAGCGGAT CTCGATCGAC AGCGCCTCGA TGTTCAACAA GGCGCTGGAG CTGATCGAGA CGCGCGAGTT CTTCGGCTTC GAGCCGGAGC GGATCGAGGC CGTCGTGCAT CCGCAGAGCA TCGTCCACGC GCTCGTGGGC TTCTGCGACG GCGGGATCAT GGCGCATCTG GGGCCGGCCG ACATGCGCCA CGCCATCGGC TTTGCGCTGA ACTGGCCGGG CCGCGGCGAG GTGCCGGTGG CGCGTCTCGA CCTCGCACAG ATTGCGAACC TCACCTTCCA GAAGCCTGAC GAAGAACGCT TTCCGGCCCT GCGCCTCGCA CGCGAGGTGA TGGCGGCGCG CGGTCTTTCG GGGGCGGCCT TCAACGCGGC CAAGGAGATT GCCCTCGACC ATTTCATCGC GGGCAACATC GGCTTTCTCG ACATGGCGGC GGTCGTCGAA GAGGCGCTTT CGGCGGTTTC TGCCGATCCG CTCTTCGGAA AAGTGCCCTC GACCCTTGAG GAAGTGCTGG CAATGGACCA TCTCGCTCGG AAGGCGGCAG AAGAAGCCGC CAGCTTCCGC CAGCAGAAAA GGTAA
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Protein sequence | MRSLSIFGAT GSIGESTFDL VMRKGGPEAF RTVALTGGRN VARLAEMARA LKAELAVTAH EECLPALREA LAGSGTEVAG GTQAIAEAAD RPADWTMSAI VGAAGLVPGM RALKHGRTLA LANKESLVTA GQLLMRTAEE NGATILPVDS EHSAVFQALA GEDTTCVERV IITASGGPFR DWTLEQIRGC TVAQAMAHPN WSMGQRISID SASMFNKALE LIETREFFGF EPERIEAVVH PQSIVHALVG FCDGGIMAHL GPADMRHAIG FALNWPGRGE VPVARLDLAQ IANLTFQKPD EERFPALRLA REVMAARGLS GAAFNAAKEI ALDHFIAGNI GFLDMAAVVE EALSAVSADP LFGKVPSTLE EVLAMDHLAR KAAEEAASFR QQKR
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