Gene Rsph17025_2146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2146 
Symbol 
ID5082924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2174417 
End bp2176795 
Gene Length2379 bp 
Protein Length792 aa 
Translation table11 
GC content65% 
IMG OID640483709 
Productsurface antigen (D15) 
Protein accessionYP_001168341 
Protein GI146278182 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4775] Outer membrane protein/protective antigen OMA87 
TIGRFAM ID[TIGR03303] outer membrane protein assembly complex, YaeT protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.766596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGGA ACCGTACGAC GAGCGGACGG GCAGGGCAGG ACCGTGGGGT GATCAGGCCG 
GCCGCGGTGT CGGTGTTCCT CGGGGTGGCA GGCGTCGCGG CAGGGCTGAC CCTGCCTGCG
CTGGCGCAGA ACTACTCGTT CAGCGACGTG CGGATCGAGG GCAACCAGCG GGTCGATGCC
ACGACCGTTC TGGGCTTTGC GCGGATCAAC CGCGGGCAGG CGGTTTCGGG CGGCCAGCTG
AACGAGGCCT ACCAGCGGCT CGCCGACTCC GGTCTCTTCG AGACGGTCGA GATCGTGCCA
CAGGGCGGAA CCCTGGTGAT CCGGGTGCAG GAATATCCGA CGATCAACGT CATCAACTTC
GAAGGCAATG CGCGGATCAA GGACGAGAAC CTCGCCACCC TGATCCAGTC CCAGTCGCGC
CGCGCCTACA ACCCCTCGCA GGCCGAGGCC GATGCCGCCG CCATCACCGA GGCCTATCGG
GTGCAGGGCC GCATCGCCGC GACCGTCACG CCGAAGATCA TCCGCCGCTC GGGCAACCGG
GTCGATCTGG TGTTCGACAT CGCCGAGGGC AAGGTCGTCG AGATCGAGCG GCTGTCCTTC
GTCGGCAACC GCGCCTATTC CGACCGCCGC CTGCGCCAGG TGCTGGAAAC CAAGCAGGCG
GGCCTGCTGC GCAGCGTCAT CGCCTCGGAT ACCTTCATCG CCGAGCGGAT CGAGCTGGAC
AAGCAGCTCC TGCGCGACTT CTACCTGTCG CGCGGCTTCA TCGACTTCGA GGTGCTCGAC
GCCACGGCCG AGGTGACGCG CGAGCGTGAC GCCTTCTTCC TCACCTTCAC CGTGCAGGAG
GGCCAGAGCT ACAGCTTCGG GCAGGTGACC GCCTCGTCCG AGGTCGAGGG TGTGGATGCG
GCCGATTTCA GCAATGCGCT GCGCATCCGC CGCGGCGTGA CCTACTCGCC CTCGGTCGTC
GAGAACAACA TCGCCCGGCT GGAGTCGCTT GCGCTGCAGA AAGGGCTGAA CTTCATCCGG
GTGGAGCCGC GCATCACCCG GAACGAGCGC AACCAGACGC TGGACGTGAA CTTCGCCCTC
GTGCGCGGCG AGCGCATCTT CGTCGAGCGG ATCGACATCG AGGGCAACAC CACGACGCTC
GATCAGGTGG TGCGGCGCCA GTTCCGCACC GTCGAGGGCG ACCCCTTCAA TCCGCGCGAA
GTGCGCCAGT CGGCCGAGCG GATCCGCGCC CTGGGCTATT TCGCCAATGC CGATGTGAAC
ACCCAGCCCG GCTCGAGCCC GGATCAGGTT GTGGTGAATG TCGATGTCGA AGAGCAGCCC
ACCGGCTCGC TCTCCTTCGG CGTGAGCTAC GGTGTCAGCT CGGGCGCGGG CTTTTCGATC
GGCTTCTCCG AGCAGAACTT CCTCGGCCGC GGCCAGATCC TCGGGCTCGA CATCTCGACC
GGGACCGACA ACATCAACAC GCAGATCAAC TTCGTCGAGC CTGCGTTCCT TGGTCGCGAC
CTGCGCTTCC GGTTCAACAC CTACTATCGG GAAACCGACA ACCAGTATTC GCGCTATGAC
ACGCGCCGGA TCGGCATTTC GCCCTCGATC GAGTTCCCGA TCAGCGAGAA CGGGCGGCTC
GAGATGCGCT ACACTTTGTC CCAGGACAAG ATCCAGAACG TGGATCGGGG TCTGGACGAC
GACGGCGACA CGGACGCCTC GTCGATCATC CTGCGGAAGG AGGAAGATCG CGGTGCGTTG
ATCGCCTCGT CGCTGGGTTA CACCTATTCG TGGGATTCGA ACCGGGGCGG CATGAACCCG
ACCGGGCGGA ATCTCTTGCG CTTCACCCAG GATTTCGCGG GCGTCGGCGG GGATGTGGAA
TATGTCTCCA CCACCGCGCT CGCGCTGACC GAGCGCAAGG TCTGGAACGA GGAACTCACC
GTTCGCGCCG TCCTCGAGGG CGGGGTGCTG AACATGATCG GCGACGATTC CTCGCGCGTG
ACCGACCGCT TCTTCGGCAA TGGCAAGATC CGCGGGTTCG AGCCGAACGG TATCGGTCCA
CGCGACCTGA ATGTCGGCAA CGAGGACGCG CTCGGCGGCA ACTACTTCGC GGTGGCCCGG
CTCGAGGCCG AGTTCCCGCT GGGCCTGCCC GAGGAATATG GCTTCATGGG CGGCGTCTTC
ATGGACGCAG GATCGGTCTG GAGCCTGGAT GACGTGAACG GCGGCGAGAA CGGCGACGAT
CCGGTGGACG ACGACTTCCA CCTCCGGTCC TCTGTCGGTG TCTCGGTCTT CTGGACCACG
CCCATCGGGC CGCTGCGGTT CAACTTTGCC AAGGCGATCG AGAAGCAGGA CTACGACAAG
GAGCAGTTCT TCGACCTGAC GATCTCGACC CGGTTCTGA
 
Protein sequence
MARNRTTSGR AGQDRGVIRP AAVSVFLGVA GVAAGLTLPA LAQNYSFSDV RIEGNQRVDA 
TTVLGFARIN RGQAVSGGQL NEAYQRLADS GLFETVEIVP QGGTLVIRVQ EYPTINVINF
EGNARIKDEN LATLIQSQSR RAYNPSQAEA DAAAITEAYR VQGRIAATVT PKIIRRSGNR
VDLVFDIAEG KVVEIERLSF VGNRAYSDRR LRQVLETKQA GLLRSVIASD TFIAERIELD
KQLLRDFYLS RGFIDFEVLD ATAEVTRERD AFFLTFTVQE GQSYSFGQVT ASSEVEGVDA
ADFSNALRIR RGVTYSPSVV ENNIARLESL ALQKGLNFIR VEPRITRNER NQTLDVNFAL
VRGERIFVER IDIEGNTTTL DQVVRRQFRT VEGDPFNPRE VRQSAERIRA LGYFANADVN
TQPGSSPDQV VVNVDVEEQP TGSLSFGVSY GVSSGAGFSI GFSEQNFLGR GQILGLDIST
GTDNINTQIN FVEPAFLGRD LRFRFNTYYR ETDNQYSRYD TRRIGISPSI EFPISENGRL
EMRYTLSQDK IQNVDRGLDD DGDTDASSII LRKEEDRGAL IASSLGYTYS WDSNRGGMNP
TGRNLLRFTQ DFAGVGGDVE YVSTTALALT ERKVWNEELT VRAVLEGGVL NMIGDDSSRV
TDRFFGNGKI RGFEPNGIGP RDLNVGNEDA LGGNYFAVAR LEAEFPLGLP EEYGFMGGVF
MDAGSVWSLD DVNGGENGDD PVDDDFHLRS SVGVSVFWTT PIGPLRFNFA KAIEKQDYDK
EQFFDLTIST RF