Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2146 |
Symbol | |
ID | 5082924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 2174417 |
End bp | 2176795 |
Gene Length | 2379 bp |
Protein Length | 792 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640483709 |
Product | surface antigen (D15) |
Protein accession | YP_001168341 |
Protein GI | 146278182 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.766596 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAGGA ACCGTACGAC GAGCGGACGG GCAGGGCAGG ACCGTGGGGT GATCAGGCCG GCCGCGGTGT CGGTGTTCCT CGGGGTGGCA GGCGTCGCGG CAGGGCTGAC CCTGCCTGCG CTGGCGCAGA ACTACTCGTT CAGCGACGTG CGGATCGAGG GCAACCAGCG GGTCGATGCC ACGACCGTTC TGGGCTTTGC GCGGATCAAC CGCGGGCAGG CGGTTTCGGG CGGCCAGCTG AACGAGGCCT ACCAGCGGCT CGCCGACTCC GGTCTCTTCG AGACGGTCGA GATCGTGCCA CAGGGCGGAA CCCTGGTGAT CCGGGTGCAG GAATATCCGA CGATCAACGT CATCAACTTC GAAGGCAATG CGCGGATCAA GGACGAGAAC CTCGCCACCC TGATCCAGTC CCAGTCGCGC CGCGCCTACA ACCCCTCGCA GGCCGAGGCC GATGCCGCCG CCATCACCGA GGCCTATCGG GTGCAGGGCC GCATCGCCGC GACCGTCACG CCGAAGATCA TCCGCCGCTC GGGCAACCGG GTCGATCTGG TGTTCGACAT CGCCGAGGGC AAGGTCGTCG AGATCGAGCG GCTGTCCTTC GTCGGCAACC GCGCCTATTC CGACCGCCGC CTGCGCCAGG TGCTGGAAAC CAAGCAGGCG GGCCTGCTGC GCAGCGTCAT CGCCTCGGAT ACCTTCATCG CCGAGCGGAT CGAGCTGGAC AAGCAGCTCC TGCGCGACTT CTACCTGTCG CGCGGCTTCA TCGACTTCGA GGTGCTCGAC GCCACGGCCG AGGTGACGCG CGAGCGTGAC GCCTTCTTCC TCACCTTCAC CGTGCAGGAG GGCCAGAGCT ACAGCTTCGG GCAGGTGACC GCCTCGTCCG AGGTCGAGGG TGTGGATGCG GCCGATTTCA GCAATGCGCT GCGCATCCGC CGCGGCGTGA CCTACTCGCC CTCGGTCGTC GAGAACAACA TCGCCCGGCT GGAGTCGCTT GCGCTGCAGA AAGGGCTGAA CTTCATCCGG GTGGAGCCGC GCATCACCCG GAACGAGCGC AACCAGACGC TGGACGTGAA CTTCGCCCTC GTGCGCGGCG AGCGCATCTT CGTCGAGCGG ATCGACATCG AGGGCAACAC CACGACGCTC GATCAGGTGG TGCGGCGCCA GTTCCGCACC GTCGAGGGCG ACCCCTTCAA TCCGCGCGAA GTGCGCCAGT CGGCCGAGCG GATCCGCGCC CTGGGCTATT TCGCCAATGC CGATGTGAAC ACCCAGCCCG GCTCGAGCCC GGATCAGGTT GTGGTGAATG TCGATGTCGA AGAGCAGCCC ACCGGCTCGC TCTCCTTCGG CGTGAGCTAC GGTGTCAGCT CGGGCGCGGG CTTTTCGATC GGCTTCTCCG AGCAGAACTT CCTCGGCCGC GGCCAGATCC TCGGGCTCGA CATCTCGACC GGGACCGACA ACATCAACAC GCAGATCAAC TTCGTCGAGC CTGCGTTCCT TGGTCGCGAC CTGCGCTTCC GGTTCAACAC CTACTATCGG GAAACCGACA ACCAGTATTC GCGCTATGAC ACGCGCCGGA TCGGCATTTC GCCCTCGATC GAGTTCCCGA TCAGCGAGAA CGGGCGGCTC GAGATGCGCT ACACTTTGTC CCAGGACAAG ATCCAGAACG TGGATCGGGG TCTGGACGAC GACGGCGACA CGGACGCCTC GTCGATCATC CTGCGGAAGG AGGAAGATCG CGGTGCGTTG ATCGCCTCGT CGCTGGGTTA CACCTATTCG TGGGATTCGA ACCGGGGCGG CATGAACCCG ACCGGGCGGA ATCTCTTGCG CTTCACCCAG GATTTCGCGG GCGTCGGCGG GGATGTGGAA TATGTCTCCA CCACCGCGCT CGCGCTGACC GAGCGCAAGG TCTGGAACGA GGAACTCACC GTTCGCGCCG TCCTCGAGGG CGGGGTGCTG AACATGATCG GCGACGATTC CTCGCGCGTG ACCGACCGCT TCTTCGGCAA TGGCAAGATC CGCGGGTTCG AGCCGAACGG TATCGGTCCA CGCGACCTGA ATGTCGGCAA CGAGGACGCG CTCGGCGGCA ACTACTTCGC GGTGGCCCGG CTCGAGGCCG AGTTCCCGCT GGGCCTGCCC GAGGAATATG GCTTCATGGG CGGCGTCTTC ATGGACGCAG GATCGGTCTG GAGCCTGGAT GACGTGAACG GCGGCGAGAA CGGCGACGAT CCGGTGGACG ACGACTTCCA CCTCCGGTCC TCTGTCGGTG TCTCGGTCTT CTGGACCACG CCCATCGGGC CGCTGCGGTT CAACTTTGCC AAGGCGATCG AGAAGCAGGA CTACGACAAG GAGCAGTTCT TCGACCTGAC GATCTCGACC CGGTTCTGA
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Protein sequence | MARNRTTSGR AGQDRGVIRP AAVSVFLGVA GVAAGLTLPA LAQNYSFSDV RIEGNQRVDA TTVLGFARIN RGQAVSGGQL NEAYQRLADS GLFETVEIVP QGGTLVIRVQ EYPTINVINF EGNARIKDEN LATLIQSQSR RAYNPSQAEA DAAAITEAYR VQGRIAATVT PKIIRRSGNR VDLVFDIAEG KVVEIERLSF VGNRAYSDRR LRQVLETKQA GLLRSVIASD TFIAERIELD KQLLRDFYLS RGFIDFEVLD ATAEVTRERD AFFLTFTVQE GQSYSFGQVT ASSEVEGVDA ADFSNALRIR RGVTYSPSVV ENNIARLESL ALQKGLNFIR VEPRITRNER NQTLDVNFAL VRGERIFVER IDIEGNTTTL DQVVRRQFRT VEGDPFNPRE VRQSAERIRA LGYFANADVN TQPGSSPDQV VVNVDVEEQP TGSLSFGVSY GVSSGAGFSI GFSEQNFLGR GQILGLDIST GTDNINTQIN FVEPAFLGRD LRFRFNTYYR ETDNQYSRYD TRRIGISPSI EFPISENGRL EMRYTLSQDK IQNVDRGLDD DGDTDASSII LRKEEDRGAL IASSLGYTYS WDSNRGGMNP TGRNLLRFTQ DFAGVGGDVE YVSTTALALT ERKVWNEELT VRAVLEGGVL NMIGDDSSRV TDRFFGNGKI RGFEPNGIGP RDLNVGNEDA LGGNYFAVAR LEAEFPLGLP EEYGFMGGVF MDAGSVWSLD DVNGGENGDD PVDDDFHLRS SVGVSVFWTT PIGPLRFNFA KAIEKQDYDK EQFFDLTIST RF
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