| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2121 |
|---|
| Symbol | |
|---|
| ID | 5082900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 2153760 |
|---|
| End bp | 2155877 |
|---|
| Gene Length | 2118 bp |
|---|
| Protein Length | 705 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640483684 |
|---|
| Product | integrase catalytic subunit |
|---|
| Protein accession | YP_001168317 |
|---|
| Protein GI | 146278158 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACAATCT CTCCGGACAA GGTGTGGTGG ACGGCGACCG AGATTGCAGT TGCCAGACTG
CCCGATCTGC CTACCAGCCA GAAGGGCGTC GATCTTCTGG CGAAGCGCCT TGGCTGGCGC
GCGCAACCGA GCCTTGCTCG TCGGCGTGCC GGTCGCGGCG GTGGCTGGGA GTACAGCTGG
CAGCTGTTCC CGCTGACCGC GCAGCGCCAG CTGCTCACCC ACGCCAAGCC GCCGGCCGCT
GCGGTGCCTG CGGCGCATGT CGATCGGGAT GAGGCGTGGA GCTGGTATGA GACCCTGCCG
CAGGCGGTGA AGGACAAGGC CGCGGCGCGG CTCGCGATCA TCCAGAAGGT CGAGGCTCTG
GAGCCGATGG TCGGGCGCTA TCTGGCCGTG GATCAGGTGG CCCGGATCTC GAAGGCGGGC
GAGCGCACGA TCTGGAACTG GCTGGGGCGG ATCGAGGGCG TGCGCCCCGA TGACCGGCTG
CCCTATCTGG CGCCCCGCCA CCGGGCCTCC CAGGCGCGGA TCCGCACGAA GGACTGCGAT
CCGGAGTTCA TGGACCTGCT CAAGTCCGAC TTCCTGCGGC TCGCGGGGCC GAGCTTCGCC
ACGTGCTACC GCCGCCAGCT GCGGGTGGCG CAGGGCAGGG GGCTGGAGAC GCTGCCGCTG
AAGACGGCGC AGCGCCGGCT GAACGCCACC GTGAGCCGGG TGACGCAGGT CCTCTGCCGC
GAGGGCATCG AGAAGGTGAA GCGGCTCTAT CCGACGCAGC GGCGGGACAA GACGGCCCTG
CATGCGCTGG AGGCGGTCAA TGCCGACTTC CACAAGTTCG ACGTTTTCGT GCGCTGGCCG
GCCGAGGGAG GCCAGCCGTC GTTTGTGGGG CGCCCGCAGA TGGTGGCGTT CCAGGACATC
TTCTCGGGGC GCATCCTCGC CTGGCGTGTG GACCAGACCC CGAACTCGAC GGCCGTGCTG
CTCGCCGCCG GCGACATGAT CGAGGACTGG GGCATTCCCG TGCATGTGCT TCTCGACAAC
GGGCGCGAGT TCGCGGCCAA GGTGGTGACC GGCGGCGCCG CGACCCGTTA CCGTTTCAAG
GTCAAGGAGG ACGACGTTCC GGGCCTCTTC ACGGCCCTCG GCTGCGAGAT CCACTGGGCT
ACGCCCTACA GCGGCCAGTC GAAGCCGATC GAGCGCGCCT TCCGCGACAT GTGCGATGCG
ATCGCCAAGG ATCCGCGCTT CGACGGGGCC TGGACCGGCA ACAAGCCCGA GGCCAAGCCG
GAGGACTATG GCAGCCGTGC CGTGGATCTC GAAGACTTCC TGCGGGTGCT GGCCGAGGGG
ATCGAGGAGC ACAACACCCG GCAGGGGCGG CGGTCGGAAG TGGCCTATGG CCGGAGCTTC
GCGGACGTCT TCGACGAGAG CTACGCGAGC GCCCCGATCC GGAAGGCGAC CGAGGCACAG
CGCCGCCTGT GGTTGCTCGG CGCCGAAGGG CTGCGGCTCA ACACCCGGAC CGGCGAGATC
GCCTTCCAGA ACAACCGCTA CTGGGCGGAG TGGATGCAGG ACGTGGCGGG CGAGCGCGTG
GTGGCCCGCT TCGATCCTGC CGACCTCTGG TCGGGCCTGC ACCTCTACAG CCAGGACGGC
GCCTATCTCG GCCATGCCCC GGCGACAGAC CGCAGCGGCT TCTTCGATCT GGAGGAGGCC
CGCATCACGG CCCGCGCCCG CCGCGCCTGG CTGAAGGCCG AGAAGGAGGC CGCCAGCGCC
CACCGCCGCT ACACCGCCGC CGAACTCGGC CGCCAGCTGG ACGAGGTGAG CCCGATCGAG
CCGCCGAAGC CCGAGGCGAA GGTGGTCCGC ATGGTGAAGG CCAAGGCCAA GGGGCCTGCG
CCGGCCACCG CGCAGCCCGC CGCCGCGCCG AAGGCCTCGG CCACCGTCAC CCCCCTTCCG
CTCCGGCCGC AGGTGCCGGC TGCGGAGGAA GCCCCCCGCG TGCGCTTCAA GCGCGCGCTC
GACCTCGAAC GCGCGCTCGA GCGTGGCGAG GAGATCACCC GCGATCAGCG CAAGTGGCTC
GCGGGCTACC AGACCAGCTC GGAGTACCGC TCGGAGCTGA TGCTGTGGCG CGTCCACGGC
GACCAGATGT TCGGATGA
|
|---|
| Protein sequence | MTISPDKVWW TATEIAVARL PDLPTSQKGV DLLAKRLGWR AQPSLARRRA GRGGGWEYSW
QLFPLTAQRQ LLTHAKPPAA AVPAAHVDRD EAWSWYETLP QAVKDKAAAR LAIIQKVEAL
EPMVGRYLAV DQVARISKAG ERTIWNWLGR IEGVRPDDRL PYLAPRHRAS QARIRTKDCD
PEFMDLLKSD FLRLAGPSFA TCYRRQLRVA QGRGLETLPL KTAQRRLNAT VSRVTQVLCR
EGIEKVKRLY PTQRRDKTAL HALEAVNADF HKFDVFVRWP AEGGQPSFVG RPQMVAFQDI
FSGRILAWRV DQTPNSTAVL LAAGDMIEDW GIPVHVLLDN GREFAAKVVT GGAATRYRFK
VKEDDVPGLF TALGCEIHWA TPYSGQSKPI ERAFRDMCDA IAKDPRFDGA WTGNKPEAKP
EDYGSRAVDL EDFLRVLAEG IEEHNTRQGR RSEVAYGRSF ADVFDESYAS APIRKATEAQ
RRLWLLGAEG LRLNTRTGEI AFQNNRYWAE WMQDVAGERV VARFDPADLW SGLHLYSQDG
AYLGHAPATD RSGFFDLEEA RITARARRAW LKAEKEAASA HRRYTAAELG RQLDEVSPIE
PPKPEAKVVR MVKAKAKGPA PATAQPAAAP KASATVTPLP LRPQVPAAEE APRVRFKRAL
DLERALERGE EITRDQRKWL AGYQTSSEYR SELMLWRVHG DQMFG
|
|---|
| |