Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2103 |
Symbol | |
ID | 5083562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 2142660 |
End bp | 2144090 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640483666 |
Product | hypothetical protein |
Protein accession | YP_001168299 |
Protein GI | 146278140 |
COG category | [R] General function prediction only |
COG ID | [COG4373] Mu-like prophage FluMu protein gp28 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.136375 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCC TCAACCCGAT CTCGCCGGTC GTCCAGTTCC TGCCCTACCA GCGGGCGTGG ATCGCCGACG ACTCGCGCTT CAAGATCGGC ATGTTCAGCC GCCAGACCGG CAAGACCTTC TCGACCTGCG GCGAGTGCGT CGACGATTGT TTCACCGCCT GGAAGGATGA CCGGAAGACC CGGTGGGTGA TCCTGTCCCG CGGCGAGCGG CAGGCGGCCG AGGCGATGAC CGAGGTGATC AAGCCGTTCA CGCGGGCGTT TTACGAGGTC TATAACACCC TCGTTAAAGG GGGCGAGCCG CGCTTCGAGG AGGGCGAGTT CCGCGCGCCC CAGGAGAAAG GGCCGGACGC CGTCTACAAG GCGCTGGAGG TGGCCTTCCC GAACGGCAGC CGCATCACGG CGCTGCCCGC GAACCCCGAC ACCGCCCGCG GCTTCTCGGC CAACGTGATC CTCGACGAGT TCGCCTTCCA CGCGAAGAGC CGCGAGATCT GGGCCGCGCT CTTCCCGGTG ATCTCGAAGG GCCGCCAGAA GCTGCGGGTG ATCAGCACGC CGAACGGCAA GGGCAACAAG TTCTACGAGC TGATGACGGC CGAGGGCTCG GTCTGGTCGC GCCACGTCGT CGACATCTAC GAGGCGGTGC GCCAGGGCCT CGACCGCGAC GTGGACATGC TGCGGGCGGG CATGGCCGAC GAGGACGCCT GGGCGCAGGA ATACGAGCTG AAGTGGCTCG ACGAGGCCAG CGCCTGGCTC GACTACGACC TGATCTCGTC CTGCGAGAGC GAGCTTGCCG GCAAGCCCGA GGGCTACCAG GGCGGGCCGT GCTTCGTCGG CGTCGACATC GCGGCGCGGA ACGACCTCTT CGTGATCTGG GTGATGGAGC TGGTCGGCGA CGTGCTCTGG ACGCGCGAGA TCATCGCCCG CCGCCGAATC TCGTTCGCCG AGCAGGACGC GCTGCTCGAC GACGTGATGC GCCGCTACCG GGTGATCCGG GTCCAAATGG ACCAGACCGG CATGGGCGAG AAGCCGGTCG AGGACGCCAA GCGCCGGCAC GGCCAGCTCA GGGTCGAGGG CGTGCTGTTC TCGGCCGCGA TCAAGCTCGG GCTCGCCGCC TCGCTGAAGG AGTCGATGCA GGACCGCAAG ACCCGGATCC CGGCAGGCGA TCCGGTGCTG CGCGCGGACC TGCACTCGAT CAAGAGCCAG GTGGGGATCA CCGGCGCCCG CCGCCTGATT GCCGACGGGG ATTCGGACGG CCACGCCGAC CGCTTCTGGG CCGGCGCGCT CGCCGTCAGC GCGGCCGAGA CGGGGGTGCA GGAGTTCGGC TACCAGGGCG TCTCGCAGGC GGCGCCGGCC GAAGGCCCGG ACGACGAGCC GGCCGCCTCG GGCCGCTGGT GGCGTCCGCC GCTCGGCGCC AGCCTCCGCG GGGGTCTCTG A
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Protein sequence | MSALNPISPV VQFLPYQRAW IADDSRFKIG MFSRQTGKTF STCGECVDDC FTAWKDDRKT RWVILSRGER QAAEAMTEVI KPFTRAFYEV YNTLVKGGEP RFEEGEFRAP QEKGPDAVYK ALEVAFPNGS RITALPANPD TARGFSANVI LDEFAFHAKS REIWAALFPV ISKGRQKLRV ISTPNGKGNK FYELMTAEGS VWSRHVVDIY EAVRQGLDRD VDMLRAGMAD EDAWAQEYEL KWLDEASAWL DYDLISSCES ELAGKPEGYQ GGPCFVGVDI AARNDLFVIW VMELVGDVLW TREIIARRRI SFAEQDALLD DVMRRYRVIR VQMDQTGMGE KPVEDAKRRH GQLRVEGVLF SAAIKLGLAA SLKESMQDRK TRIPAGDPVL RADLHSIKSQ VGITGARRLI ADGDSDGHAD RFWAGALAVS AAETGVQEFG YQGVSQAAPA EGPDDEPAAS GRWWRPPLGA SLRGGL
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