| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2075 |
|---|
| Symbol | |
|---|
| ID | 5082780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 2117648 |
|---|
| End bp | 2118868 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640483638 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001168271 |
|---|
| Protein GI | 146278112 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.15968 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.242694 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGA CGTCCGCACT GCCCGCCTCC GATGCCCGCG CCCGCCGCAA CGTGATCGTC
CTCGTGGCCG CGCAGGCGAT CCTCGGCTCG CAGCTTTCGA TGGTCTTCAT CGTGGCGGGT
CTTTCGGGCC AGACGCTTGC TCCGAACCCC TGCTGGGCGA CGCTACCGAT CACGCTGGCC
GTGACGGGAT CGATGCTCTC GGCCACGCCG CTCTCGGCGA TCATGCAGCG GTTCGGGCGG
CGGGCCGGGT TCGTCCTTGG CGCGCTGGCC GGGGCCGCCG GGGCCGGGGT CTGCGCGCTG
GGGCTGATGC AGGGCTCGTT CGCGCTGTTC CTCGCAGGCT CGCTCCTGAC CGGCATCTAC
ATGTCGGCGC AGGGGTTCTA CCGCTTTGCC GCCGCCGATA CGGCCTCCGA GGCCTTTCGC
CCCAAGGCGA TCTCGTGGGT CATGGCGGGC GGGCTCCTTT CGGCCGTCAT CGGCCCGCAG
GTCGTCAAGC TGACGGCCGA GTCGATGGTG GTGCCCTTCC TCGGCACCTA CCTCGCGGCC
ATCGGGCTGA ACCTCGGGGG GATGCTGCTC TTTGCCTTCC TCGACATTCC GCGCCCTGCG
GCGCCCGCCC TGGGCAGCCC GCGCGGCCGC AGCCGGAGCG AGCTGATCCG CGACCCCCGC
ATTGCCGTGG CGGTGATCTG CGCGACCGTC GCTTATGCGC TGATGAACCT CGTGATGACC
TCGTCGCCGC TTGCGGTGGT GGGCTGCGGC TTTGCCACGT CGGACGCGGC CGACGTGGTG
ACGGCCCATG TGCTGGCCAT GTATGGGCCG AGCTTCTTCA CCGGCCATGT GATCGCCCGG
ATCGGAGCGG AAAAGGTGAT GGCGGCGGGG CTGGCCATCC TTGCGGCCTC GGGCGCGGTC
GCGCTCTCGG GGGTGGAACT GGGGCATTTC TTCGGCGCGC TCGTGCTGCT CGGGATCGGC
TGGAACTTCG GCTTCATCGG CGCGACGGCC ATGCTGGCCT CGGCCCATGC GCCGGAAGAG
CGGGGGCGCG TGCAGGGTCT GAACGACCTG ATCGTGTTCG CGGGCGTGGC GGCCGCCTCG
CTGGCCTCGG GCGGGCTGAT GAACTGCTCG GGCGGGACGG TCGAGGCCGG CTGGCAGGCC
GTGAACCTCG CCATGCTCCC GTTTCTCGTG GCGGCCGGAG GCGCGCTGAT CTGGCTCGCC
CTGCGCCCGA AAGAGGGCTG A
|
|---|
| Protein sequence | MSQTSALPAS DARARRNVIV LVAAQAILGS QLSMVFIVAG LSGQTLAPNP CWATLPITLA
VTGSMLSATP LSAIMQRFGR RAGFVLGALA GAAGAGVCAL GLMQGSFALF LAGSLLTGIY
MSAQGFYRFA AADTASEAFR PKAISWVMAG GLLSAVIGPQ VVKLTAESMV VPFLGTYLAA
IGLNLGGMLL FAFLDIPRPA APALGSPRGR SRSELIRDPR IAVAVICATV AYALMNLVMT
SSPLAVVGCG FATSDAADVV TAHVLAMYGP SFFTGHVIAR IGAEKVMAAG LAILAASGAV
ALSGVELGHF FGALVLLGIG WNFGFIGATA MLASAHAPEE RGRVQGLNDL IVFAGVAAAS
LASGGLMNCS GGTVEAGWQA VNLAMLPFLV AAGGALIWLA LRPKEG
|
|---|
| |