| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2072 |
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| Symbol | |
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| ID | 5082777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 2114538 |
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| End bp | 2116163 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640483635 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_001168268 |
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| Protein GI | 146278109 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.770044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.178392 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTAAAGG AGCGGCTCTG GATCTACGAC ACGACGCTGC GCGACGGGCA GCAGACACAG
GGCGTGCAGT TCTCGACCTC GGACAAGCGG CAGATCGCGC TGGCGCTCGA TGCGCTGGGG
GTGGACTACA TCGAAGGCGG CTGGCCGGGG GCAAATCCGA CCGACAGCGA CTTCTTCGCC
CATGCGCCGC AGCTCGGGGC GCGGCTCTCG GCCTTCGGGA TGACCAAGCG CGCGGGCCGC
TCGGCCGAGA ATGACGATGT GCTCGCGGCG GTGCTGGATG CGGGGACAGG CACGGTCTGC
CTCGTCGGCA AGGCGCATGA GTTCCATGTG ACCACGGCGC TCGGCGTGAC GCTGGAGGAG
AACCTCGAGT CGATCCGCGC CTCGGTCGCC CATGTGGTGG GCAAGGGGCG CGAGGCGATC
CTCGATGCCG AGCATTTCTT CGACGGCTAC AAGGCGAACC CGAGGTATGC GCTCGACTGC
CTGAAGGCCG CGCTGGAGGC GGGGGCGCGC TGGGTCGTGC TCTGCGACAC CAACGGCGGC
ACGCTTCCGG CCGAGGTGGG GCGGATCGTG GCCGAGGTGA TCGCGGCGGG CGTGCCGGGG
GACCGGCTCG GCATCCACAC CCACGACGAC ACGGGCACGG CGGTGGCGGC GACGCTGGCG
GCGGTCGATG CGGGCGCGCG GCAGGTGCAG GGCACGCTGA ACGGGCTGGG CGAGCGGTGC
GGCAACGCCA ACCTCACCGC GCTGATCCCG ACGTTCCTGC TCAAGGAGCC CTACGCCAGC
CGGTTCGAGA CCGGCATCTC GCGCGAGGCG CTGGCCGGGA TGGTGCGGAT CAGCCGGATG
CTCGACGACA TCCTGAACCG GGTGCCGCGC CGCGCCTCGG CCTATGTCGG CGCCTCGGCC
TTTGCGCACA AGGCGGGGCT GCATGCCTCG GCGATCCTCA AGGACCCCGC GACCTACGAA
CATATCGACC CCGCGCTGGT GGGCAACGTG CGGGTGATCC CGATGTCGAA CCAGGCGGGC
CAGTCGAACC TGCGCGCCCG CCTCGCCGCC GCCGGGATCG AGGTTCCGGC CGGCGATCCG
CGCCTCGGCC GCATCCTCGA GGTGATCAAG GCGCGCGAGG ATCAGGGTTA TGCCTACGAT
TCCGCCCAGG GCAGCTTCGA GCTGGTGGCG CGGCGGGAAC TGGGGCTCAT GCCCTCGTTC
TTCGAGGTGA AGCGGTATCG CGTGACGGTC GAGCGGCGGC GGGTCGGCGA GGGCACCATG
ACGCTCTCGG AGGCCGTGGT GGTCGTGATC ATCGACGGGC AGCGGGTGCT GTCGGTCTCG
GAGAGCCTGG ACGAGAACGG GACCGAACGC GGCCCCGTCA ACGCGCTGTC GAAGGCGCTG
GCCAAGGATC TGGGGCGCTG GCAATCGGTG ATCGACGACA TGCGGCTTGT CGATTTCAAG
GTGCGGATCA CCCAGGGCGG CACCGAGGCC GTCACGCGCG TCATCATCGA CAGCGAGGAC
GGACAGGGGC GGCGCTGGTC CACCGTCGGC GTCTCGCCCA ACATAGTGGA TGCCTCGTTC
GAGGCGCTGC TGGACGCGAT CAACTGGAAG CTCGTGCGCG ACGCACGGCG CGGGGAGGGA
TCATGA
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| Protein sequence | MVKERLWIYD TTLRDGQQTQ GVQFSTSDKR QIALALDALG VDYIEGGWPG ANPTDSDFFA
HAPQLGARLS AFGMTKRAGR SAENDDVLAA VLDAGTGTVC LVGKAHEFHV TTALGVTLEE
NLESIRASVA HVVGKGREAI LDAEHFFDGY KANPRYALDC LKAALEAGAR WVVLCDTNGG
TLPAEVGRIV AEVIAAGVPG DRLGIHTHDD TGTAVAATLA AVDAGARQVQ GTLNGLGERC
GNANLTALIP TFLLKEPYAS RFETGISREA LAGMVRISRM LDDILNRVPR RASAYVGASA
FAHKAGLHAS AILKDPATYE HIDPALVGNV RVIPMSNQAG QSNLRARLAA AGIEVPAGDP
RLGRILEVIK AREDQGYAYD SAQGSFELVA RRELGLMPSF FEVKRYRVTV ERRRVGEGTM
TLSEAVVVVI IDGQRVLSVS ESLDENGTER GPVNALSKAL AKDLGRWQSV IDDMRLVDFK
VRITQGGTEA VTRVIIDSED GQGRRWSTVG VSPNIVDASF EALLDAINWK LVRDARRGEG
S
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