| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2061 |
|---|
| Symbol | |
|---|
| ID | 5082766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 2103729 |
|---|
| End bp | 2104598 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640483623 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001168257 |
|---|
| Protein GI | 146278098 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.255505 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.159895 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCC GCTTTCTCGA GAGCTTCGTC GCCGTGGCCG ATTGCGGGTC GATCGCCGAG
GCCGCACGGC GGCTGAACCT GACGCCGGCC GCCCTGTCGC AGCGGTTGCG CACACTCGAG
CAGGATCTGG GCCATTCGCT GGTCATGCGG GCGGGGCGGC GCGTGCGGCC CACGGCTTCG
GGGCTCGCGG TGCTCGACCA CGCCCGCCAT CTGATCGAGG GGGCGCGCGA CCTGCGCGCG
ATCGCGGCGC AGGACGAGCC CGCGGGGCAG CTGCGCCTGG GCGGCATCGC CACCTCTCTC
ACGGGACTCC TGCCCGGCAT CATCGCCCGG CTGCGCGCGC GCCATCCCCG GATCGAATAT
TTCATCCGGC CGGATTCGTC GGTGAACCTC TATCACGGGG TCATCTCGGG CGATCTGGAC
GCGGCGGTGA TCGTGCGCCC CCAGTTTCCG GTGCCGAAAT CGACCGGCTG GCTGACGCTG
CGCGAAGAGC CGCTTGTGCT GCTGGCGCCG GAAGAGGCGG ACGGCGCCGA TCCGCTGGAG
ATGATCCAGA GCCATCCGTT CATCCGCTAT GACCGCAACC AGTGGGGCGG CCAGATCGTG
GACCGCTACC TGAGACAGAA CGAGATGAAG CTGCGCGAGT GGCTGGAGCT GGACGCGCTT
GACGCGATCG CGGGGCTGGT GAGCCGCGGG CTCGGTGTCG CCATCGTGCC CGACTGGGCG
CCGCCCTGGC CCGAGGGGCT GCGCCTGCAG AAGATCGCCC TGCCCGACGC GGGCGGACGC
CAGACGGGCG TTCTGTGGAA CCTCTCGGGG GCGCGGATCT CGGCCATGCA GGCCTTCGTC
TCCGCCTGCC GGGACGCCGA GACCGGATAG
|
|---|
| Protein sequence | MDIRFLESFV AVADCGSIAE AARRLNLTPA ALSQRLRTLE QDLGHSLVMR AGRRVRPTAS
GLAVLDHARH LIEGARDLRA IAAQDEPAGQ LRLGGIATSL TGLLPGIIAR LRARHPRIEY
FIRPDSSVNL YHGVISGDLD AAVIVRPQFP VPKSTGWLTL REEPLVLLAP EEADGADPLE
MIQSHPFIRY DRNQWGGQIV DRYLRQNEMK LREWLELDAL DAIAGLVSRG LGVAIVPDWA
PPWPEGLRLQ KIALPDAGGR QTGVLWNLSG ARISAMQAFV SACRDAETG
|
|---|
| |