| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2057 |
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| Symbol | |
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| ID | 5082762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 2099845 |
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| End bp | 2100630 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640483619 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001168253 |
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| Protein GI | 146278094 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.337178 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTGG GTATCGGAGG CAAGACGGCG CTGGTTCTGG GCGCGGGCGG GGGCCTCGGC
GGCGCCATCG CCCGCTCGCT CGCCCGCGAG GGCGTGCGGG TGGCGCTGGG CGACATCGAC
CTCGCCGCGG CCGAAGCCAC CGCCGAGGCG ATCCGGGCCG AGGGCGGCAC CGCCCTGCCG
CTCGCCTGGG ATCTGGCCGA TCTCGGCGCG ATCGACGCGC ACATCCGCCG GATCGAGGCC
GAGCTGGGCC CGGTGGACAT CCTCGTGAAC AACACGGGCG GGCCGAAGCC CTCGACTGTC
TCGGGGCAGG ATCCCGCGCT CTGGCGCGCG AGCTTCGAGT CCATGGTGCT CTCGGTGATC
GCCATCACCG ACCGCGTGCT GCCGGGCATG AAGGCGCGCA AATGGGGCCG GATCATCACC
TCGACCTCGT CGGGCGTGGT GGCGCCGATC CCGAACCTCG GCCTGTCGAA CGCGCTGCGC
ATCTCGCTCG TGGGCTGGTC CAAGACGCTG GCGCGCGAGG TGGGGGGGGA TGGCATCACC
GCCAACATCG TCCTGCCGGG GCGCGTGGCC ACCCCGCGCA TCACCTTCCT CGACGAACAG
AAGGCCGCGC GCGAGGGCCG GCCCGTGGCC GAGGTGGCCG CCGAAAGCGT GGCCGCGATC
CCGGTCGGCC GCTATGGTCA GCCCGAGGAA TACGGCGACG CCGTGGCCTT CCTCGCCTCG
GCCCGCGCCT CCTACATCAC GGGCAGCACC ATCCGCATCG ACGGCGGCCT GATCGCCAGC
GTCTGA
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| Protein sequence | MDLGIGGKTA LVLGAGGGLG GAIARSLARE GVRVALGDID LAAAEATAEA IRAEGGTALP
LAWDLADLGA IDAHIRRIEA ELGPVDILVN NTGGPKPSTV SGQDPALWRA SFESMVLSVI
AITDRVLPGM KARKWGRIIT STSSGVVAPI PNLGLSNALR ISLVGWSKTL AREVGGDGIT
ANIVLPGRVA TPRITFLDEQ KAAREGRPVA EVAAESVAAI PVGRYGQPEE YGDAVAFLAS
ARASYITGST IRIDGGLIAS V
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