Gene Rsph17025_2056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2056 
Symbol 
ID5082761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2099112 
End bp2099828 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content71% 
IMG OID640483618 
Producthypothetical protein 
Protein accessionYP_001168252 
Protein GI146278093 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.339166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.33839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG ACACCGACAA GGAACAGGCC CTGATCGAGG CCCTGCGCGG CGTGACCACC 
GCGACCCTCA CCACCGTCCT TCTGAAGAAG GGCCTGCGCA ACGTCTGGAT GCGCGGCGCC
TTCCCGCTCC AGCCGGGGCA ACCGCGCATC GTGGGCCGGG CCTTCACCCT GCGCTTCGTG
CCCGCGCGCG AGGATCTGGC GACCCCGGCC AGCTGGTCCT CGCCGATCTC GACCCGCGCC
GCCATCGAGG CCATGCCCGA GGGCTGCATC TGCGTGGCCG ACGCCATGGG CATCACGGAT
GCGGGTATCT TCGGCGACAT CCTCTGCGCG CGCATGAAGA AGCGCGGCGT GGCGGCGCTG
GTGACGGACG GCGTGGTGCG CGACGGCGCG GGCGTGCGGG GAACCGGCCT GCCGGTCTGG
TGCAACGGCG TGGCCGCGCC TCCCTCGGTC GCGGGGCTGA CCTTCGTGGC CTGGCAGGAG
CCGGTGGGCT GCGGCGGCGT CGCCGTCTTC CCCGGCGACA TGGTGGTGAT CGACGACGAC
GGCGCCGTGC TGATCCCGGC CGATCTGGTC GAGGCCGTCA CCGGGGAATC GGTCGAGCAG
GAGCGTCTCG AGGGCTGGAT CATGACCCAG GTCGAGGAGG GCGTTGCCCT GCCGGGCCTC
TATCCCGCCA ACGCCGAGAA CAAGGCGAAA TACGAGGCCT GGAAATCCGG CGAGTGA
 
Protein sequence
MTTDTDKEQA LIEALRGVTT ATLTTVLLKK GLRNVWMRGA FPLQPGQPRI VGRAFTLRFV 
PAREDLATPA SWSSPISTRA AIEAMPEGCI CVADAMGITD AGIFGDILCA RMKKRGVAAL
VTDGVVRDGA GVRGTGLPVW CNGVAAPPSV AGLTFVAWQE PVGCGGVAVF PGDMVVIDDD
GAVLIPADLV EAVTGESVEQ ERLEGWIMTQ VEEGVALPGL YPANAENKAK YEAWKSGE