| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2050 |
|---|
| Symbol | |
|---|
| ID | 5082755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 2093021 |
|---|
| End bp | 2094007 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640483612 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
|---|
| Protein accession | YP_001168246 |
|---|
| Protein GI | 146278087 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.642834 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.145485 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTGTC TGATCGTCCA ACCCATACAT GAAGCGGGCC TTGCGGCCCT GCGCGAGGCC
GGGATCACAC CCGTCCCCTG CCCGGCGCCC GACATGGCGA CCGTGGCGCG CCACATGTGC
GGCATCGACG CCGTGATCAC GCGCGACGCG GGCCTCGATG CCGCGGCCTT CGCCGCCGCC
GACCGGCTGA GGGCCGTGGT GGTGCATGGC GCCGGCCACG ATCCGGTGGA CAAGGAGGCG
GCCGCGCGCG CCGGCGTCAT CATCGCCAAC ACGCCCGGCG CCAATGCCCG CTCGGTGGCC
GAACTGGCCG TGGGGCTCGC GCTGGCCGTG GCCCGCCGCA TTCCCGCCGC CGACCGGGCC
CTGCGCGATG GTGAAAAAGG TTTTCGCGAG TCCGCCCGCT TCCACGAACT GCGTGGCCGG
ACCGCCCTCA TCGTCGGCTG GGGCGCCATC GGGCGCGAGA CGGGGCGGAT GCTGGCACAG
GCGTTCGACA TGCGGCTGCT CGTCCATTCC CCGCGCTCGC CGCGGATCGA GGGTGGCGAG
GCCGTGGGCA GCCTGCACGA GGGGCTGGCC CGCGCCGATC TCGTCTCGCT GCACACGCCC
CTGCGGGACG CGACGCGTCA CATGATCGAC GCTCCGGCCC TTGCCGCCAT GCGGCGGGGG
GCCATCCTGA TCAACATGGC CCGCGCGGGC CTCGTGGACG AGGCGGCGCT GCAGGAGGCG
CTGGCCTCGG GCCATCTGGG CGGCGCGGGG CTCGATGTCT CCTCGCCCGG CGCGCCGACG
GGGCCGCTCG CGGCGCATGG GAATGTGGTC TTCACCCCCC ATCTCGGCGG CACCACCGAA
GAGGCGCTGC GCCGCGTGGC GCTCGAGGCC GTGCGGCATG TGGTCGAGGC GCTGAACGGG
CGGCTGCCCG CCACCGCGAT CAACCCCGAG GTCTGGGGCC ATGCCGCCCG CGCCGCGGCA
CCCGAGGCCG GAGGAGCCAC CGCATGA
|
|---|
| Protein sequence | MNCLIVQPIH EAGLAALREA GITPVPCPAP DMATVARHMC GIDAVITRDA GLDAAAFAAA
DRLRAVVVHG AGHDPVDKEA AARAGVIIAN TPGANARSVA ELAVGLALAV ARRIPAADRA
LRDGEKGFRE SARFHELRGR TALIVGWGAI GRETGRMLAQ AFDMRLLVHS PRSPRIEGGE
AVGSLHEGLA RADLVSLHTP LRDATRHMID APALAAMRRG AILINMARAG LVDEAALQEA
LASGHLGGAG LDVSSPGAPT GPLAAHGNVV FTPHLGGTTE EALRRVALEA VRHVVEALNG
RLPATAINPE VWGHAARAAA PEAGGATA
|
|---|
| |