| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2044 |
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| Symbol | |
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| ID | 5082658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 2087597 |
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| End bp | 2088580 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640483606 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001168240 |
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| Protein GI | 146278081 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.289699 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGG GACGTATCAC TGTCATCGCG GCCTTTGCCG CATCGGTCGC CGCAACCTCG
GCTTCGGCGC AGACTCACTG GGACATGTCG ATCGTCTGGC CCGAGGGCAA CTTCCACACC
CAGAACGCGA TGGCCTTCGC GGATGCGGTG CGCGAGGCCA CCGACGGCGA GGTGGAGATC
ACGGTCCATT CCGGCGGCGC GCTCGGCATC AAGGGACCGG AGGGCATGGC GGCCGTTCGG
GACGGTCTGG TGCCGATCGC CGAGATCCTG CTCAACCAGC AGGTGGGCGA GGCGCCGGTG
CTGGGCATCG AGACCCTGCC CTTCCTCGCC CCTTCGATGT CCGAGCTGGC GCTCCTGCAC
AAGTTCTACC GGCCCAAGCT GGACGAGGTT GCCGCGGGGA TGAACCAGAA GATCCTCTAC
ATGGTGCCGT GGCCGGGACA GGCCGTCTTC GCGCCCAACC CCATCAACAC GGTCGAGGAT
CTGAAGGGCC TGACCATCCG CGTCGTCGAT TCGAACGGCA ACGACTTCTT CGGCGCGCTC
GGGGCCACCC CGATCCAGAT GCCCTGGGGC GAGGTCGTGC CCTCGCTGGC GGCGGGGACG
ATCAAGGGCG TGACGACCTC CTCCTCCTCG GGGGTGGACG GCGCCTTCTG GGAATTCACC
AAACACATGA GCACCTTCAA CTGGCAGGCC TCGTCGAACA TCATGTCGGT GAACCTCGAT
GCCTGGAACG CGCTGCCCGC CGAGACTCAG GCCGCGATCG AGGAGACCGC GGCCAACCTC
GAGGGCCAGT TCTGGCTCAA CAGCCGCGCC GAGGACGACA AGAAGCTCGC CACCCTGCGC
GAGAACGGCG TCGAGATCAC GGCGCCTTCG CCCGAACTGT CGGCGGCGCT GATGGAAAAG
GCCCTGCCGC TCTGGGAGGC CTTCAAGACC CGCGTGCCCG AGGCCGCGCC GGTGATCGAC
GCCTATCTCA TGCTGCGCGA CTGA
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| Protein sequence | MKQGRITVIA AFAASVAATS ASAQTHWDMS IVWPEGNFHT QNAMAFADAV REATDGEVEI
TVHSGGALGI KGPEGMAAVR DGLVPIAEIL LNQQVGEAPV LGIETLPFLA PSMSELALLH
KFYRPKLDEV AAGMNQKILY MVPWPGQAVF APNPINTVED LKGLTIRVVD SNGNDFFGAL
GATPIQMPWG EVVPSLAAGT IKGVTTSSSS GVDGAFWEFT KHMSTFNWQA SSNIMSVNLD
AWNALPAETQ AAIEETAANL EGQFWLNSRA EDDKKLATLR ENGVEITAPS PELSAALMEK
ALPLWEAFKT RVPEAAPVID AYLMLRD
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