Gene Rsph17025_2043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2043 
Symbol 
ID5082657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2086651 
End bp2087421 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content68% 
IMG OID640483605 
ProductLamB/YcsF family protein 
Protein accessionYP_001168239 
Protein GI146278080 
COG category[R] General function prediction only 
COG ID[COG1540] Uncharacterized proteins, homologs of lactam utilization protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.815905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGAA AGATCGATCT GAACTGCGAC ATGGGCGAGA GCTTTGGCGC CTATGTGATC 
GGCGACGACG CCGGGATGCT GGAGCTTGTC ACCTCGGCCA ACATCGCCTG CGGCTTCCAC
GCCGGCGATC CGGTGGTGAT GCGTCGCACG ATCCGCATGG CGAAGGAAAA GGGCGTGTCC
GTCGGGGCGC ACCCCTCGTT CGCCGACCTC TACGGATTCG GGCGGCGGCG GATCTCGGGC
GAGCGGCCCG AGGATCTCGA GACTCAGCTG ATCTTCCAGA TCCTCGCGCT TCAGGGCATG
GCCGCTCTGG AAGGCCATCC GATGACCCAT GTGAAGACCC ACGGCGCGCT CGGCAACATG
GCGGCGGTCG ATCCCGATCT GGCCGCGCTC TGCGTCCGCG CGATCCAGGC GGTGGATCCC
GGTCTCATCT TCGTGACGCT TCCCTATTCG GAAACCCATC GGGCGGCCGA GAAGGCGCGT
CTGCCGGTCG CCGTCGAGAT CTACGCCGAC CGCACCTACA CCGATCAGGG CGAGCTGACG
CCGCGCAGCC AGCCGGGGGC GGTGATCCAC GACCCCGAAC AGAGCCTCGA GCAGGTGCTC
GAGATGGTGG TCAACGGCCA TATCCCGACG ACGGGCGGCA AGCGCCTGCC GGTTGCCCCC
GACACGCTCT GCATCCACGG CGACACCGCC GGCGCGGTCG GGATCGCCCG CCGCCTGCGC
GGTGCGCTTG AAGAGAACGG CATCCGGATC GAGCCCTTCG CCCGCCCCTG A
 
Protein sequence
MAGKIDLNCD MGESFGAYVI GDDAGMLELV TSANIACGFH AGDPVVMRRT IRMAKEKGVS 
VGAHPSFADL YGFGRRRISG ERPEDLETQL IFQILALQGM AALEGHPMTH VKTHGALGNM
AAVDPDLAAL CVRAIQAVDP GLIFVTLPYS ETHRAAEKAR LPVAVEIYAD RTYTDQGELT
PRSQPGAVIH DPEQSLEQVL EMVVNGHIPT TGGKRLPVAP DTLCIHGDTA GAVGIARRLR
GALEENGIRI EPFARP