| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2040 |
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| Symbol | |
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| ID | 5082654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 2083154 |
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| End bp | 2084641 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640483602 |
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| Product | phytoene dehydrogenase-related protein |
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| Protein accession | YP_001168236 |
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| Protein GI | 146278077 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.492251 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACAGA TTGTGCCGAA GGTGGTGGTG GTCGGTGCCG GGATGGGCGG ATTGGCGTCC
GCCATCCGTC TTGCGCGGGC CGGGTGCGAG GTGACGCTGG TCGAGGCGCG GGACGCGCCG
GGGGGGCGCA TGCGCGCCCT TCCCAGCGTC GCAGGTCCGG TGGACGCGGG CCCGACCGTC
CTGACCCTTC GGAGCGTTTT TGACGACATC TTCGAGAGTT GCGGGCAGAA GCTCGATCAT
CACCTGACCC TTCTTCCCCA GCCGCTTCTG GCGCGGCACT GGTGGCTGGA CGGCAGCACG
CTCGACCTCA CGACCGACCT CGAGGCGAAT GTCGAGGCGG TTGCCGCCTT CGCCGGCGCG
CCCGAGGGCG AGCGCTTCCG CCGCTTCCAT GAGCTTTCGG CGCGGCTTTA TGACGCTTTC
GACCGGCCCA TGATGCGGGC GGCAAAACCG GACACCCGGG CCATCGCGCG GGCCGCCTTG
AAGGAACCCC GGATCTGGCC CGCCCTGCTG CCCGGCATGA CCCTCGACCG GCTGCTGAGG
CTGTGCTTCC GCGACCCGCG ACTCCGGCAG CTGTTCGGGC GGTATGCGAC CTATGTCGGC
GGCACGCCCT ACGCCTCGCC CGGCGTGCTG GCCCTGATCT GGGCCGCCGA GGCGCAGGGC
GTCTGGGCGG TCGAGGGCGG GATGCACCGC CTTGCCCTCG CGCTGGCGCG GCTGGCCGAG
GATCAGGGCG TGACGATCCG CTACAATGCC CCGGTCGCGC GCATCCTGCG CCAGAAGGGC
CGCGCCTCGG GCGTCCAGCT GGCCGATGGC CATTCTCTGC ACGCCGATCA TGTCGTCTTC
AACGGCGATC CCGCGGCGCT TCTTGCGGGT CTTCTCGGCG ATGGGCCCAA GGATGCCGTG
CCCGAGGACC GCATCCACCC CCGCAGCCTC TCGGCCTGGG TCTGGTCCTA CGCCGCCCGC
GCCGAGGGCC AGCCGCTCGT CCACCACAAC GTCTTCTTCG CCGACGATCC GCGGCGCGAG
TTCGGACCGA TCGCCGCAGG ACAGATGCCG GAGGATGCGA CACTCTACAT CTGCGCCGAG
GACCGCGCGG GCGGGCAGGT TCCCGACGGA CCCGAGCGTT TCGAGATCAT CATGAACGGG
CCGCCCGGCC GACCCGCCAG ACCCGAGGAT TTTGCGCAAT GCCGCAGCCG AACCTTCGAC
CGACTGAGAC AGTTCGGACT GACCTTCGAC CCGGTGCCGG GCGAGACGAA CCTGACGCCG
CCCACGGGAT TTGCGAAGCT GTTCCCGGGG TCGCAGGGCT CGATCTACGG GCTGAGCCCG
CACGGGGCGC TGGCCTCGCT CAAGCGTCCG CTGGCGCGGA CGGCCCTGCC GGGCCTGTGG
CTGGCGGGGG GCGGGGCGCA TCCGGGGGCG GGCGTGCCGA TGGCGGCCCT CTCCGGACGG
CACGCGGCCG AGGCGATCGT GACGGACCTT GCTTCGCGAT CGAGGTAG
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| Protein sequence | MRQIVPKVVV VGAGMGGLAS AIRLARAGCE VTLVEARDAP GGRMRALPSV AGPVDAGPTV
LTLRSVFDDI FESCGQKLDH HLTLLPQPLL ARHWWLDGST LDLTTDLEAN VEAVAAFAGA
PEGERFRRFH ELSARLYDAF DRPMMRAAKP DTRAIARAAL KEPRIWPALL PGMTLDRLLR
LCFRDPRLRQ LFGRYATYVG GTPYASPGVL ALIWAAEAQG VWAVEGGMHR LALALARLAE
DQGVTIRYNA PVARILRQKG RASGVQLADG HSLHADHVVF NGDPAALLAG LLGDGPKDAV
PEDRIHPRSL SAWVWSYAAR AEGQPLVHHN VFFADDPRRE FGPIAAGQMP EDATLYICAE
DRAGGQVPDG PERFEIIMNG PPGRPARPED FAQCRSRTFD RLRQFGLTFD PVPGETNLTP
PTGFAKLFPG SQGSIYGLSP HGALASLKRP LARTALPGLW LAGGGAHPGA GVPMAALSGR
HAAEAIVTDL ASRSR
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