Gene Rsph17025_2029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2029 
Symbol 
ID5082643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2073200 
End bp2074126 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content65% 
IMG OID640483591 
Productphotosynthetic reaction center subunit M 
Protein accessionYP_001168225 
Protein GI146278066 
COG category 
COG ID 
TIGRFAM ID[TIGR01115] photosynthetic reaction center M subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.995154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.889355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGT ATCAGAACAT CTTCACCCAG GTGCAGGTCC GCGGACCGGC TGACCTGGGG 
ATGACGGAGG ACGTCAACCT TGCCAACCGT TCGGGCGTGG GTCCCTTCTC GACCCTCATC
GGCTGGTTCG GCAACGCCCA GCTCGGCCCG ATCTACCTCG GCAGCCTCGG CGTCCTGTCC
CTGTTCTCGG GCTTCCTGTG GTTCTTCACC ATCGGGATCT GGTTCTGGTA TCAAGCGGGG
TGGAACCCGG CCGTGTTCAT GCGCGACCTG TTCTACTTCT CGCTCGAGCC GCCAGCGCCG
GAATACGGCC TCTCCTTCGC GGCTCCGCTG AAGGAAGGCG GGCTCTGGCT GATCGCCTCG
TTCTTCATGT TCGTGTCGGT CTGGGCCTGG TGGGGTCGGG TCTATCTGCG GGCGCAAGCC
CTCGGCATGG GCAAGCACAC CGCCTGGGCG TTCCTCTCGG CCATCTGGCT CTGGATGGTG
CTGGGCTTCA TCCGTCCGAT CATGATGGGC TCCTGGTCCG AGGCGGTTCC CTACGGGATC
TTCTCGCACC TCGACTGGAC GAACAACTTC TCGCTCGTCC ACGGGAACCT GTTCTACAAC
CCCTTCCACG GTCTCTCGAT CGCCTTCCTC TACGGTTCGG CCCTGCTCTT CGCGATGCAC
GGTGCGACCA TCCTCGCGGT CTCCCGCTTC GGCGGCGAGC GCGAGCTGGA GCAGATCGCC
GACCGCGGGA CGGCGGCGGA GCGGGCGGCC CTCTTCTGGC GCTGGACCAT GGGCTTCAAC
GCCACGATGG AAGGCATCCA CCGCTGGGCC ATCTGGATGG CGGTCCTCGT GACCCTCACC
GGCGGCATCG GCATCCTGCT CTCGGGCACC GTCGTGGACA ACTGGTACGT CTGGGGCCAG
AACCACGGCA TGGCGCCGCT GAACTGA
 
Protein sequence
MAEYQNIFTQ VQVRGPADLG MTEDVNLANR SGVGPFSTLI GWFGNAQLGP IYLGSLGVLS 
LFSGFLWFFT IGIWFWYQAG WNPAVFMRDL FYFSLEPPAP EYGLSFAAPL KEGGLWLIAS
FFMFVSVWAW WGRVYLRAQA LGMGKHTAWA FLSAIWLWMV LGFIRPIMMG SWSEAVPYGI
FSHLDWTNNF SLVHGNLFYN PFHGLSIAFL YGSALLFAMH GATILAVSRF GGERELEQIA
DRGTAAERAA LFWRWTMGFN ATMEGIHRWA IWMAVLVTLT GGIGILLSGT VVDNWYVWGQ
NHGMAPLN