Gene Rsph17025_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2005 
Symbol 
ID5082369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2047686 
End bp2048288 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content64% 
IMG OID640483567 
ProductNADH dehydrogenase subunit C 
Protein accessionYP_001168201 
Protein GI146278042 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAG CCCTTCAGGA ACTGGCCGCG CATGTCGAGA TGCGCCAGCC CGACGCGATC 
CTCGGTCATC GGATCGAGTT CGGCGAGCTG ACGCTGGATG TCGCGCCGAA CCGTATCGTC
GGACTGGTCG AGTTCCTGCG CACCGACGCG CGCTGCCGGT TCTCGTCGCT GGTGGACATC
ACGGCCGTGG ACCATCCCGA GCGGCCGGCC CGCTTCGACA TGGTCTATCA CTTCCTGTCG
ATGTATCAGA ACCATCGCAT CCGCCTGAAG ATGCAGGTGC GCGAGGACGA GACGGTGGCC
TCGATCCATT CCGTGCACCC CTCGGCCAAC TGGTTCGAGC GCGAGGTGTT CGACATGTTC
GGCATCCTCT TCACCGGCCA CCCCGACCTG CGCCGCATCC TGACCGACTA CGGCTTCCGT
GGCCATCCGA TGCGCAAGGA CTTCCCGACG ACGGGTTACA CCGAGGTCCG CTATGACGAG
GTCCAGAAGC GCGTGATCTA CGAGCCGGTG AAGCTGGTGC AGGAATACCG CCAGTTCGAC
TTCCTTTCCC CGTGGGAAGG TGCGGACTAC ATCCTGCCCG GCGACGACAA GGCACGGACG
TAA
 
Protein sequence
MAEALQELAA HVEMRQPDAI LGHRIEFGEL TLDVAPNRIV GLVEFLRTDA RCRFSSLVDI 
TAVDHPERPA RFDMVYHFLS MYQNHRIRLK MQVREDETVA SIHSVHPSAN WFEREVFDMF
GILFTGHPDL RRILTDYGFR GHPMRKDFPT TGYTEVRYDE VQKRVIYEPV KLVQEYRQFD
FLSPWEGADY ILPGDDKART