| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2003 |
|---|
| Symbol | |
|---|
| ID | 5082367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 2045556 |
|---|
| End bp | 2046467 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640483565 |
|---|
| Product | NADH dehydrogenase subunit E |
|---|
| Protein accession | YP_001168199 |
|---|
| Protein GI | 146278040 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
|---|
| TIGRFAM ID | [TIGR01958] NADH-quinone oxidoreductase, E subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.277346 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCGCC GCCTGCATCA CGCCCAGCCC GACAGCTTCG CCTTCACCTC GGCGAACCTC
GAATGGGCGC GTGGCCAGAT CTCGAAATAT CCCGAAGGCC GTCAGGCCTC GGCCATCATC
CCGCTTCTGT GGCGCGCGCA GGAACAGGAG GGCTGGCTCA CCAAGCCCGC CATCGAACAT
GTGGCCGACA TGCTGGGCAT GGCCCGCATC CGGGCGCTGG AAGTGGCGAC CTTCTACTTC
ATGTTCCAGC TGCAACCCGT TGGCCGCGTG GCTCATATCC AGATCTGCGG CACGACCTCG
TGCCTGATCT GCGGCGCCGA GGAGCTGATC CGCGTCTGCC GCGAGAAGAT CGCGCCGCAG
CCGCACATGC TGTCGGCCGA TGGCCGCTTT TCGTGGGAAG AGGTCGAGTG CCTCGGCGCC
TGCGCGAACG CGCCCATGGC CCAGATCGGC AAGGACTATT ACGAGGATCT GAACGCCGAG
ACGCTGGCCG CGCTGATCGA CCGCTTCTCG GCGGGGGATG TGCCGCGGCC CGGCTCGCAG
ATCGGGCGTT TCTCGTCCGA GCCCGCGGGC GGCGCCACGA GCCTGACCGA GGTCGGCCCG
CGGGTCTCCG AGCACAACGC CTCGGTGGCG CTGGCGCTCG GGATCGGTGA CACGATCAAG
CGGATCGACG GGACCGAGGT TCCGATCCTG ACCCCGTGGC TGGGCCGGCG TCCGCCGGTG
GCCGAGGCGG CGGGCGAGCC GCAGAGGCCT ACACCCGGCG CGGGCCGTCC GGTGGACAAG
ACCGGCGTCA CCATCGAGGA GGCCCCGGCC GATCGGGCGG CGCGGCCCGA GAAGCCGGGC
GTGGCCACCG GCGGAACGGC CACGGCCGAG CCGGGGGCGC AGACCGCCGA TCCGAAGAAG
CCCGAGGGCT GA
|
|---|
| Protein sequence | MLRRLHHAQP DSFAFTSANL EWARGQISKY PEGRQASAII PLLWRAQEQE GWLTKPAIEH
VADMLGMARI RALEVATFYF MFQLQPVGRV AHIQICGTTS CLICGAEELI RVCREKIAPQ
PHMLSADGRF SWEEVECLGA CANAPMAQIG KDYYEDLNAE TLAALIDRFS AGDVPRPGSQ
IGRFSSEPAG GATSLTEVGP RVSEHNASVA LALGIGDTIK RIDGTEVPIL TPWLGRRPPV
AEAAGEPQRP TPGAGRPVDK TGVTIEEAPA DRAARPEKPG VATGGTATAE PGAQTADPKK
PEG
|
|---|
| |