Gene Rsph17025_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1993 
Symbol 
ID5082357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2036112 
End bp2038259 
Gene Length2148 bp 
Protein Length715 aa 
Translation table11 
GC content65% 
IMG OID640483555 
ProductNADH dehydrogenase subunit L 
Protein accessionYP_001168189 
Protein GI146278030 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 
TIGRFAM ID[TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.351523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTA TCATCCTCCT GGCGCCGCTC CTCGGCGCGC TGATCTGCGG CTTCGGCTGG 
CGTCTCATCG GCGAGCGGGC GGGGCAGATC ATCGCCACCG CGCTCGTCTT CCTCGCGGCG
CTGCTGTCCT GGATCATCTT CCTCGGCTTC GACGGCGAGA TGTATCAGGT CGTCCTGCTG
CGCTGGATCG AGAGCGGCTC GCTTTCGACC GAATGGGCGA TCCGCATCGA CCGGCTGACC
GCGATCATGC TGGTGGTTGT GAACACCGTC TCGGCGCTCG TGCACCTGTA TTCCTTCGGC
TACATGGCGC ATGACGACAA CTGGAACCAC CACGAGCATT ACAAGGCGCG CTTCTTCGCC
TATCTGTCCT TCTTCACCTT CGCGATGCTG ACGCTGGTGA CCTCGGACAA CCTCGTGCAG
CTCTTCTTCG GCTGGGAGGG TGTCGGTGTC GCCTCCTACC TGCTGATCGG CTTCTACTAC
CGGAAACCCT CCGCCAACGC GGCCGCGATC AAGGCCTTCG TGGTGAACCG CGTGGGTGAC
TTCGGCCTCG CCCTTGGCAT CATGGCCCTG TTCTTCCTGG TGGATTCGAT CCGCTTCGAC
GATGTCTTCG ACGCGGTGCC GCAGCTTGCG CAGACCAACG TCACCTTCCT GTGGACCGAA
TGGAATGCCG CGAACCTTAT TGGCGTGCTG CTCTTCATCG GCGCGATGGG GAAATCGGCC
CAGCTCGGCC TGCACACCTG GCTTCCCGAC GCGATGGAGG GCCCGACGCC CGTCTCGGCG
CTGATCCATG CCGCGACCAT GGTGACCGCG GGCGTCTTCC TCGTCTGCCG CATGTCGCCG
CTTTACGAGT TCGCGCCCGA CGCCCAGACC ATGATCGTCG TGGTCGGCGC CACCACCGCC
TTCTTCGCGG CGACCGTGGG CCTCGTGCAG AACGACATCA AGCGCGTGAT CGCCTATTCG
ACCTGCTCGC AGCTTGGCTA CATGTTCGTG GCGGCCGGCG TGGGCGTCTA TTCGGCGGCC
ATGTTCCACC TCTTCACCCA CGCCTTCTTC AAGGCGATGC TGTTCCTTGG GGCGGGCTCG
GTCATCCATG CCATGCACCA CGAGCAGGAC ATGCGGAACT ACGGCGGGCT GCGCCACAAG
ATCCCACTGA CCTTCTGGGC GATGATGATC GGCACCTTCG CCATCACCGG CGTCGGCATC
CCGCTCACCC ATATCGGTTT CGCCGGGTTC CTCAGCAAGG ACGCGATCAT CGAGAGCGCC
TTCGTGGGCT CCTCCTATGC CTTCTGGCTG CTGGTCGTGG CCGCCTGCTT CACCAGCTTC
TATTCCTGGC GGCTGATCTT CCTGACCTTC TTCGGCACGC CGCGCGGCGA TCACCACGCC
TATGATCATG CGCACGAAAG CCCGAAGACC ATGCTGATCC CGCTGGGCGT CCTGGCGCTC
GGGGCGGTGT TCTCGGGGAT GATCTGGTAC AATTCCTTCT TCGGCGACCA CAACCGCGTG
GCCACCTGGT TCGGCATCCC GCATCACGCG GCCTCCTCGG AAGAGGGCGA GTCGCACGCC
GAGGCCGCGG CCGAGCACGG AGCGGGGACC CAGGCCGCCG ACGAGGCGCT GCCCGAGGCC
GGCAACCTGA CCGGTGCCGG CGAGGCGCCG AGCGCGGCCG AGACCGAGGC CCACGCCGAG
GTGGCCGGGC TTGGTCCGAT CGGCGCGATC TACATGGGCC CCGAGAACCA TGTGATGGAC
GAGGCGCACC ATGCGCCGGT CTGGGTCAAG GTCTCGCCCT TCGTGGCCAT GCTGATCGGC
TTTGCCTTTG CCTGGCTTTT CTACATCGCC AAGCCGTCGC TGCCGGGGGC GCTCGCGCGG
AACCAGCGTC CGCTCTACCT CTTCCTGCTG AACAAGTGGT ATTTCGACGA GCTGTATGAC
GTGATCTTCG TCCGTCCGGC CCGGTTCATC GGCCGCTTCC TGTGGAAGCG GGGCGACGGG
GCGGTGATCG ACGGCGCGAT CAACGGGCTC GCGCTGGGGA TCATCCCGGC GCTGACCCGG
CTCGCCGGTC GCGTGCAGTC CGGCTACATC TTCCACTATG CCTTCGCCAT GTTCCTCGGC
ATCGCGATCC TCATTACCTG GATGACGCTC ACGGGGGGCG CGCACTGA
 
Protein sequence
MTTIILLAPL LGALICGFGW RLIGERAGQI IATALVFLAA LLSWIIFLGF DGEMYQVVLL 
RWIESGSLST EWAIRIDRLT AIMLVVVNTV SALVHLYSFG YMAHDDNWNH HEHYKARFFA
YLSFFTFAML TLVTSDNLVQ LFFGWEGVGV ASYLLIGFYY RKPSANAAAI KAFVVNRVGD
FGLALGIMAL FFLVDSIRFD DVFDAVPQLA QTNVTFLWTE WNAANLIGVL LFIGAMGKSA
QLGLHTWLPD AMEGPTPVSA LIHAATMVTA GVFLVCRMSP LYEFAPDAQT MIVVVGATTA
FFAATVGLVQ NDIKRVIAYS TCSQLGYMFV AAGVGVYSAA MFHLFTHAFF KAMLFLGAGS
VIHAMHHEQD MRNYGGLRHK IPLTFWAMMI GTFAITGVGI PLTHIGFAGF LSKDAIIESA
FVGSSYAFWL LVVAACFTSF YSWRLIFLTF FGTPRGDHHA YDHAHESPKT MLIPLGVLAL
GAVFSGMIWY NSFFGDHNRV ATWFGIPHHA ASSEEGESHA EAAAEHGAGT QAADEALPEA
GNLTGAGEAP SAAETEAHAE VAGLGPIGAI YMGPENHVMD EAHHAPVWVK VSPFVAMLIG
FAFAWLFYIA KPSLPGALAR NQRPLYLFLL NKWYFDELYD VIFVRPARFI GRFLWKRGDG
AVIDGAINGL ALGIIPALTR LAGRVQSGYI FHYAFAMFLG IAILITWMTL TGGAH