Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1980 |
Symbol | |
ID | 5082344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 2021481 |
End bp | 2022317 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640483542 |
Product | hypothetical protein |
Protein accession | YP_001168176 |
Protein GI | 146278017 |
COG category | [R] General function prediction only |
COG ID | [COG2607] Predicted ATPase (AAA+ superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.831237 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0452906 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGACC CGCTGGAGCG GATCGCGGCG GCGCTCGAAC GGATGAGCCC GCCGCCGATG CCGGCCCCCG ATTTCGCCTC GGCCGACGCC TTTGCGTGGC ACACCGCGCC GGACCGGCTC GAGCCGGTCG AGCGGGTGGC GCGGGTGGAC CTTTCGCTTC TGGTGGGGGT CAACCGGGCG CGCGACATCC TGTTTGCGAA CACCGAGCAT TTCGCCCGCG GCCTGCCGGC CAACAACGCG CTGCTCTGGG GCGCGCGTGG GATGGGAAAG TCCAGCCTTG TCAAGGCGAT CCATGCCGCG GTTGTGGCGC GGGGCCTGCC GCTCAAGATC GTGGAGCTCA GCCGCGAGGA TCTGCCCTCG GTCCAGCGGC TGCTGAAGCA TCTGCGCTCG GCACCCTTCC GCTTCATCCT CTTCTGCGAC GACCTGTCGT TCAGCCACGA TGACCAGCAT TACAAATCGC TCAAGGCGGT GCTGGACGGC GGGATCGAGG GGCGGCCCGA GAATGTGATC CTCTATGCGA CCTCGAACCG CCGGCACCTC ATGCCGCGCG ACATGATCGA GAACGAGCGA TCGACCGCCA TCAGCCCCTC CGAAGCGGTG GAAGAGAAAG TGTCGCTCTC GGACCGCTTC GGGCTGTGGC TGGGCTTCCA CCCGTGCTCG CAGGACGAAT ATCTCGAGAT GATCCGCGGC TATTGCGCGG CGCACGGGCT GTCCGTCGCC GAGGAGGAAC TGCGGGCCGA GGCGATCGAA TGGCAGGCGA CGCGCGGCTC GCGTTCGGGG CGGGTGGCTT GGCAGTTCTT CACCGATCTC GCCGCGCGCC ACGGCGTCGC GCTCTAG
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Protein sequence | MTDPLERIAA ALERMSPPPM PAPDFASADA FAWHTAPDRL EPVERVARVD LSLLVGVNRA RDILFANTEH FARGLPANNA LLWGARGMGK SSLVKAIHAA VVARGLPLKI VELSREDLPS VQRLLKHLRS APFRFILFCD DLSFSHDDQH YKSLKAVLDG GIEGRPENVI LYATSNRRHL MPRDMIENER STAISPSEAV EEKVSLSDRF GLWLGFHPCS QDEYLEMIRG YCAAHGLSVA EEELRAEAIE WQATRGSRSG RVAWQFFTDL AARHGVAL
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