| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1978 |
|---|
| Symbol | |
|---|
| ID | 5082342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 2019367 |
|---|
| End bp | 2020026 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640483540 |
|---|
| Product | protein-L-isoaspartate O-methyltransferase |
|---|
| Protein accession | YP_001168174 |
|---|
| Protein GI | 146278015 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
|---|
| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.145869 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.127834 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCAG GCCCGGACGA GGAGGATCCG GCAGAGCGCA AGATGCGGTT CCTGTTCGCC
GTCCGCTCGC GCGGCGTCAC CGATGCCCGC GTGCTCGCCG CGATGGAGCG GATCGACCGC
GGCGCCTTCG TCCGGGGCAT CTTCGCCGAC CGCGCCTACG AGGACATGCC GCTTCCCATC
GCCTGCGGCC AGACCATCAG CCAGCCCTCG GTCGTGGGGC TGATGAGCCA GGCGCTGGCG
ATCAATCCGC GCGACAAGGT GCTCGAGATC GGAACCGGAT CGGGCTATCA GGCCGCGATC
CTGAGCCAGC TTGCGCGCCG CGTCTACACC GTCGATCGCC ACCGGCGGCT GGTGCGGGAA
GCGACCGAGC TGTTCCATCG GCTGGGGCTG ACCAACATCA CCGCCCTGGC CGCCGACGGC
AGTTTCGGCC TGCCGGAACA GGCGCCCTTC GACCGCATCC TCGTCACCGC CGCCGCCGAG
GATCCGCCGG GGCCCCTGTT GGCACAGCTC AAGATCGGCG GTATCATGGT GGTCCCGGTC
GGGCAGACCG ACGCCGTGCA GAACCTGATC AAGGTGACGC GGCTCGAGCA GGGCTACGAC
TACGAGGAAC TTCGCCCGGT GCGCTTCGTG CCGCTGATCG AAGGGATCGG GACCGACTGA
|
|---|
| Protein sequence | MTAGPDEEDP AERKMRFLFA VRSRGVTDAR VLAAMERIDR GAFVRGIFAD RAYEDMPLPI
ACGQTISQPS VVGLMSQALA INPRDKVLEI GTGSGYQAAI LSQLARRVYT VDRHRRLVRE
ATELFHRLGL TNITALAADG SFGLPEQAPF DRILVTAAAE DPPGPLLAQL KIGGIMVVPV
GQTDAVQNLI KVTRLEQGYD YEELRPVRFV PLIEGIGTD
|
|---|
| |