Gene Rsph17025_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1964 
Symbol 
ID5082439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2005927 
End bp2006850 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content73% 
IMG OID640483526 
ProductHPr kinase 
Protein accessionYP_001168160 
Protein GI146278001 
COG category[T] Signal transduction mechanisms 
COG ID[COG1493] Serine kinase of the HPr protein, regulates carbohydrate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.447407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCG AGACGTCCTC TCTCCGGCCT GCGCTGCGGA CCGCCTACGG GCTCGCGTGG 
CGCTCGGACG TGGATCTGCC CGAGCTGGAG CCGCTGGAAG GCGACAGGGC GGCCGACCTC
ACGGTGCACC GTGCACCGCT CGATGATCTG CCGGGCGAGG GGGGCTTCCG CACCCGCTTT
GCGCCCGATC GGGCCGAGCT CTGGTGGCAG ACGGTGGGCG GCTTCCGGGT CGAGCCGGGC
CGGATCACGG CCAGCCCGCA CCCCGGCGTG TCGGAGGATC TCGTGGCCTA TCCGCTGCTG
GGCTCGGTGC TGGCGCTGGC TCTGGAGCAG TTGGGGCTCT TCACGCTCCA TGCGAGCGCG
GTGTCGGTGG GCGGCCGCGG CGTGGTGATG ATGGGCGACA AGGGGGCGGG CAAATCCACG
ACCGCGACGG CGATGATCCG CGCGGGCCAT CCGCTCATCG CGGACGACAT CGTGGCGGTG
GACGAGACCC TGTCGCTCCG CCCCGGCTTT CCCCAGGTCA AGCTGTCACC GGCGGCGGCC
GCGGCCTTCG ATGCGCCGGA TGCGGTCCAT CGCCCGGTGG TGCCCGAGGT GCCCGAGAAG
AGCCGCGTGC TGTTGCCCGG CCGGTTCGCC CGCGGTGTCA CGCCGCTCCG GCGGATCTAC
CGGCTTGAAC GCGGTCCGGC CGAGGCCGAG CCTGCCGTGA TCGCCGTGCC GCCGTTCGAG
GCGCTGCCGC TGGCCCTGCG CTTTGCCTAT GTCACCCGCT TCGGCGCCGA GGTGCTGAAC
GGCGCCGCCG GCGCCCGGCA TCTGCGGCAG GCCGCGGCCA TAGCCGCCAG CGGCGTCCTG
CATCGCGTGA TCGTGCCCCA CGATCTTCGG CGGCTGCCCG AGGTGGTGGC CCTGATCGAG
CGGGATGCGG AGGCTGCGGC GTGA
 
Protein sequence
MIVETSSLRP ALRTAYGLAW RSDVDLPELE PLEGDRAADL TVHRAPLDDL PGEGGFRTRF 
APDRAELWWQ TVGGFRVEPG RITASPHPGV SEDLVAYPLL GSVLALALEQ LGLFTLHASA
VSVGGRGVVM MGDKGAGKST TATAMIRAGH PLIADDIVAV DETLSLRPGF PQVKLSPAAA
AAFDAPDAVH RPVVPEVPEK SRVLLPGRFA RGVTPLRRIY RLERGPAEAE PAVIAVPPFE
ALPLALRFAY VTRFGAEVLN GAAGARHLRQ AAAIAASGVL HRVIVPHDLR RLPEVVALIE
RDAEAAA