| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1948 |
|---|
| Symbol | |
|---|
| ID | 5082423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 1988840 |
|---|
| End bp | 1989421 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640483510 |
|---|
| Product | glutathione-dependent formaldehyde-activating enzyme |
|---|
| Protein accession | YP_001168144 |
|---|
| Protein GI | 146277985 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3791] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02820] S-(hydroxymethyl)glutathione synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAGG GAGACGTCAA GATCCATCCG TCGGTGGACA ACGGCATCGC GCCGGCGCGG
GATGATTTCC ACGGCGGCAC GTTACGGTGC AAATGCACCG ACCGGCCGGT CGAGGTGCGC
ATCAACGCCC AGGCGGCGCA CAACCACGTC TGCGGCTGCA CGAAATGCTG GAAGCCCGAG
GGGGCGATCT TCAGCATGGT GGCGGTCGTG CCGCGCGAGG CGGTCGAGGT GGTGGCCAAC
GGCGACAAGC TGAAGGTCGT CGACAGCAGC ATGGCGATCC AGCGCCATGC CTGCACGGGC
TGCGGCACGC ACATGTTCGG CCGGATCGAG AACAAGGACC ACCCGTTCTA CGGGCTCGAC
TTCATCCATA CCGAACTCTC CTCGGAGGAG GGCTGGTCGC CTCCGGGCTT CGCGGCCTTC
GTCTCCTCGG TGATCGAGAG CGGGGTGGCC CCGGATCGGA TGGACGGCAT CCGCGCCCGT
CTGCGCGACC TCGGGCTCGA GCCCTATGAT GCGCTCTCGC CGCCGCTGAT GGATGCGATC
GCCACGCATC TGGCCAAGCG TTCGGGCAAG CTCGCCGCCT GA
|
|---|
| Protein sequence | MTQGDVKIHP SVDNGIAPAR DDFHGGTLRC KCTDRPVEVR INAQAAHNHV CGCTKCWKPE
GAIFSMVAVV PREAVEVVAN GDKLKVVDSS MAIQRHACTG CGTHMFGRIE NKDHPFYGLD
FIHTELSSEE GWSPPGFAAF VSSVIESGVA PDRMDGIRAR LRDLGLEPYD ALSPPLMDAI
ATHLAKRSGK LAA
|
|---|
| |