Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1927 |
Symbol | |
ID | 5084052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 1970498 |
End bp | 1971286 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640483489 |
Product | ABC transporter related |
Protein accession | YP_001168123 |
Protein GI | 146277964 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.20546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCACG TCCGGCTCGA GCAGGTCTCG CTCGCCTTCG GGCAGGGCAC CGACCGGATG CCGGCGCTCG AGCGGGTCTC GCTCTCGCTG AGGCGCAACG AGGTGGTGGT GGTGCTCGGC CCGTCGGGTT GCGGCAAGAC CACCCTCTTG CGGCTGGTCG CGGGCCTGCT CGCGCCCGAC GCGGGGCGCG TGAGCGTGGA TGACCGCCCT CCGCGGCCGG GCGCGGATGC GGCGATGGTC TTCCAGTCCT TCCGCCTGAT CCCGTGGAAG AGCGCGCGCG AGAACGTAGC CTTCGCGCTG CCCCATCTGC CGCGCGCCGA GGCGCGGGCC CGCGCCGATG CCTATCTCGA TCTGGTCGGC CTTTCACGCT TCGCGAAAAG CTGGCCTGCG CAGCTCTCGG GCGGGATGCG GCAGCGGCTG GCGCTCGCCC GCGCGCTGGC GGCCGAGCCG GGGATCCTCT TGATGGACGA GCCCTTCGCC AGCCTCGACG CGCAGTCGCG CGAACTGATG CAGATCGAGC TGATGCGGCT GATGGAGCGG CGGCCGGCGA CGGTGCTTTT CGTGACCCAC TCGGTCGATG AGGCGCTGAT CATGGCCGAC CGGATCCTGC TCATGTCGCC GCGTCCGGGC CGCGTGGTCG AGGAACTGGA GGTGCCCTTC CCGCGGCCGC GGTGGGAGGG CGACATCCGC GCCCTGCCCC TTTATGCCGA GCTGCGCCGC CACCTCTGGG ACCGGCTGCG CGACATGGTG TTGAACGACC CGGGCTCGGA CTTCCACGGC CGGCGCTAG
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Protein sequence | MTHVRLEQVS LAFGQGTDRM PALERVSLSL RRNEVVVVLG PSGCGKTTLL RLVAGLLAPD AGRVSVDDRP PRPGADAAMV FQSFRLIPWK SARENVAFAL PHLPRAEARA RADAYLDLVG LSRFAKSWPA QLSGGMRQRL ALARALAAEP GILLMDEPFA SLDAQSRELM QIELMRLMER RPATVLFVTH SVDEALIMAD RILLMSPRPG RVVEELEVPF PRPRWEGDIR ALPLYAELRR HLWDRLRDMV LNDPGSDFHG RR
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