Gene Rsph17025_1925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1925 
Symbol 
ID5084050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1968696 
End bp1969496 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content70% 
IMG OID640483487 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001168121 
Protein GI146277962 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.320411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.383291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGAC CGAGACCGCA GAACGGCCCC GGCCGGCGCC CGACGGGTGC CGGGACGGTC 
ACCCTGCTGC GCCTTGCGTT CCTGCTCTGC CTGATCCTTC TGTGGGCCCT GGCCGCGGCC
ACCGTGCCAA GGGGGATGAT CCCGTCGCCC GCGGCCACGG TCGAGGCGGC CGGGCGCCTC
CTATCGGAGG GCCGGCTGCA GGGCGCGCTT GGACAGAGCC TCATCACCTA TGGCACGGGC
CTCGGCGCGG CGATCCTCGT GGGCATCCCG CTGGGGGCGC TGATGGGCAT GGTGCGTCTC
TTCGGGCGCA CGGTCGATGT CTTCGTCTTC GCCCTCGCCG CGACGCCGCG GGTGGCCTTC
ATCCCCCTCA TCATCCTGCT GCTCGGCCTC GGGATCGAGG CGAAGGCCAT GATCGTCTTC
CTTGGCGCGG TCATGCCCAT CATCCTCAAC ACCTATGCGG GCGTGCAGGC CCGCGATGAA
GAGCTGATCG AGATGGCCCG CTCGACCGGC GCCTCGGCGA CGCGCATCCA GATCCATGTG
GTCCTGCCCG GCGCGCTGCC CTTCCTTGTG GTGGGGCTGC GCCTTGGCGC CACCATCGGC
CTGATCAACA CCGTGGTGGC CGAACTCTAC ACCGCCGTGT CCGGTCTCGG GGGTCTGCTC
GCCCTCTATG GCAACACCTT CCGCATGGCG GAATATTTCG TGATCGTGCT GGCCCTCGCC
GCGATCGGCG TGATCGTGAC CGAGAGCCTT CGCCTGCTGG AGGGCCGCCT GTCGCGCTGG
CGCCTTCCGG GCAGGCCGTA A
 
Protein sequence
MTGPRPQNGP GRRPTGAGTV TLLRLAFLLC LILLWALAAA TVPRGMIPSP AATVEAAGRL 
LSEGRLQGAL GQSLITYGTG LGAAILVGIP LGALMGMVRL FGRTVDVFVF ALAATPRVAF
IPLIILLLGL GIEAKAMIVF LGAVMPIILN TYAGVQARDE ELIEMARSTG ASATRIQIHV
VLPGALPFLV VGLRLGATIG LINTVVAELY TAVSGLGGLL ALYGNTFRMA EYFVIVLALA
AIGVIVTESL RLLEGRLSRW RLPGRP