Gene Rsph17025_1918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1918 
Symbol 
ID5084043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1961610 
End bp1962299 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content71% 
IMG OID640483480 
Producthypothetical protein 
Protein accessionYP_001168114 
Protein GI146277955 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.78991 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGGAC GCATGGCCCA CAAGGAGCTG ACCTGGGCTC AGCTGGCCGG CTGGATGCAG 
GGGCTGGCGC CCGCGCGGGC CGAGATCGAG ACGCGCTACA ACGTCCCGCC CACCGCGCTG
ATCCCCATCG TGCGGCGGAC GGAATCGGGG CTTCAGGGCG ATCTTGCGCG ATGGGGCCTC
ATCCCGCCCT TTCACCGCGG CGCCCTCCGG GACTGGAAGG CCAGCACCAT CAACGCCCGC
ATCGAGAGCG TGGCCACCGC GCCGAGCTTT CGCGCCGCCT ATCGCGGCGG GCGCTGCCTC
GTGATCGCTT CGGGCTATTA CGAATGGCAG CTGCGCGGGG GGGTGAAGCA TCCGCATTAC
ATGTCGCCCG CCGGCAATGC CCCGGCGCTG CTGATGGCCG GGCTCGAGAG CCGGGTGCGG
CTGGCCGACT ACGAGGGGCC GACCTGCGCC ATCCTGACCG AGCCGGTGCG CGAGGGGCTG
GCCCGGGTCC ATGACCGGAT GCCGGTCATG ATGGACCTCG AGGCGGCCGG CGACTGGCTG
GGCGGCTGCC CGGTGGAGGA TCTGCCGCGG ATCCCGATGG CCGCGCTGCG CTGGCATGAG
GTCGGGCGCC GCGTGAGTTC CGTCCGCAAC GAAGGCCCCG AACTGATCGA GCCGATCGAG
CCCGCCCTGC CGGATCTCTT CTCGCGCTGA
 
Protein sequence
MCGRMAHKEL TWAQLAGWMQ GLAPARAEIE TRYNVPPTAL IPIVRRTESG LQGDLARWGL 
IPPFHRGALR DWKASTINAR IESVATAPSF RAAYRGGRCL VIASGYYEWQ LRGGVKHPHY
MSPAGNAPAL LMAGLESRVR LADYEGPTCA ILTEPVREGL ARVHDRMPVM MDLEAAGDWL
GGCPVEDLPR IPMAALRWHE VGRRVSSVRN EGPELIEPIE PALPDLFSR