| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1899 |
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| Symbol | tdh |
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| ID | 5084024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 1945866 |
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| End bp | 1946891 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640483460 |
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| Product | L-threonine 3-dehydrogenase |
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| Protein accession | YP_001168095 |
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| Protein GI | 146277936 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase
[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.198837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCGCGC TGGTCAAGGC GAAGGCAGAG CCCGGTCTCT GGATGGAGGA GCGCCCGGTG
CCCGGGATCG GCCCCGACGA GGTGCTGATC CGGGTGAAGA AGACCGGGAT CTGCGGCACC
GATGTGCATA TCTGGAACTG GGACGAATGG GCGGCCCGGA CGGTGCCGGT GCCGCTGGTG
ACCGGGCACG AGTTCGCCGG CGAGATCGTC GAGGTGGGCC GCGATGTCGA GGATCTGACG
GTCGGCCAGA GATGCTCGGG CGAGGGGCAC CTCATCGGGC ATCATTCGCG ACAGGTGCGC
GCGGGGCGCT TTCACCTCGA TCCCGAGACA CGGGGCATCG GGGTCAATGT TGCCGGCGCC
TTTGCCGATT ACCTCCGGCT GCCGGCCTTC AACGTGGTGC CGCTGCCCGA CTCGATCGAC
GACGAGGTGG GGGCGATCCT CGACCCGCTC GGCAATGCGG TTCACACGGC GCTCAGTTTC
GATCTGGTGG GCGAGGATGT GCTGATCACC GGGGCAGGCC CGATCGGCAT CATGGCGGCG
GCCGTCGCCC GGCATGTCGG CGCGCGGCAT GTGGTCATCA CCGACGTCAA TCCCGACAGG
CTGCGGCTCG CAAGCGAGGT TGCCGATGTC GTGCCGGTCA ATGTCGCCTC CGAGGATCTG
CGCGAGGTCA TGGGGCGGCT CAGGATCGTG CAGGGCTTCG ACGTCGGCAT GGAGATGTCG
GGCGCGCCGG CGGGCTTTGA CCAGATGGTC GAAGCGATGG TGATGGGCGG CCGGATCGCG
ATGCTGGGCA TACCGCCCGG CCGCAGCCCC GTGGACTGGA GCCGCATCGT CTTCAAGGCC
CTGACGATCA AGGGCGTCTA TGGCCGCGAG ATCTTCGAGA CCTGGTACAA GATGATCGCG
ATGCTCGAGA ACGGCCTCGA CATCCGCCGG GTGATTACCC ACCGCTTCCC CGTGGCGGAC
TTTGCCGAGG GCTTTGCCGT CATGCGCGGC GGAACCTCGG GCAAGGTGGT CCTGGACTGG
GGCTGA
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| Protein sequence | MRALVKAKAE PGLWMEERPV PGIGPDEVLI RVKKTGICGT DVHIWNWDEW AARTVPVPLV
TGHEFAGEIV EVGRDVEDLT VGQRCSGEGH LIGHHSRQVR AGRFHLDPET RGIGVNVAGA
FADYLRLPAF NVVPLPDSID DEVGAILDPL GNAVHTALSF DLVGEDVLIT GAGPIGIMAA
AVARHVGARH VVITDVNPDR LRLASEVADV VPVNVASEDL REVMGRLRIV QGFDVGMEMS
GAPAGFDQMV EAMVMGGRIA MLGIPPGRSP VDWSRIVFKA LTIKGVYGRE IFETWYKMIA
MLENGLDIRR VITHRFPVAD FAEGFAVMRG GTSGKVVLDW G
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